RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 IPO8O15397 1037 aaKnown RBP16.08■□□□□ 0.17
NSMCE1-208ENST00000565070 KCNQ3O43525 872 aa16.08■□□□□ 0.17
NSMCE1-208ENST00000565070 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 TRIM37O94972 964 aa16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 TWISTNBQ3B726 338 aaPredicted RBP16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
NSMCE1-208ENST00000565070 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
NSMCE1-208ENST00000565070 IGHDP01880 384 aa16.07■□□□□ 0.16
NSMCE1-208ENST00000565070 SNRPA1P09661 255 aaKnown RBP16.07■□□□□ 0.16
NSMCE1-208ENST00000565070 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
NSMCE1-208ENST00000565070 LAMB4A4D0S4 1761 aa16.06■□□□□ 0.16
NSMCE1-208ENST00000565070 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
NSMCE1-208ENST00000565070 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 MRPL50Q8N5N7 158 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 LY75O60449 1722 aa16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 DDX19BQ9UMR2 479 aa16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
NSMCE1-208ENST00000565070 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
NSMCE1-208ENST00000565070 C5P01031 1676 aa16.04■□□□□ 0.16
NSMCE1-208ENST00000565070 RGPD3A6NKT7 1758 aaPredicted RBP16.04■□□□□ 0.16
NSMCE1-208ENST00000565070 RGPD4Q7Z3J3 1758 aa16.04■□□□□ 0.16
NSMCE1-208ENST00000565070 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
NSMCE1-208ENST00000565070 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
NSMCE1-208ENST00000565070 SIK1P57059 783 aa16.03■□□□□ 0.16
NSMCE1-208ENST00000565070 PTF1AQ7RTS3 328 aa16.03■□□□□ 0.16
NSMCE1-208ENST00000565070 PDE4AP27815 886 aa16.03■□□□□ 0.16
NSMCE1-208ENST00000565070 BACH2Q9BYV9 841 aa16.03■□□□□ 0.16
NSMCE1-208ENST00000565070 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
NSMCE1-208ENST00000565070 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.16
NSMCE1-208ENST00000565070 TJP1Q07157 1748 aa16.02■□□□□ 0.15
NSMCE1-208ENST00000565070 PLSCR1O15162 318 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 STARD3NLO95772 234 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 APBA3O96018 575 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 ITPRIPQ8IWB1 547 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 ERBB4Q15303 1308 aa16.01■□□□□ 0.15
NSMCE1-208ENST00000565070 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 ABCC4O15439 1325 aa15.99■□□□□ 0.15
NSMCE1-208ENST00000565070 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
NSMCE1-208ENST00000565070 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
NSMCE1-208ENST00000565070 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
NSMCE1-208ENST00000565070 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
NSMCE1-208ENST00000565070 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
NSMCE1-208ENST00000565070 BAG6P46379 1132 aa15.97■□□□□ 0.15
NSMCE1-208ENST00000565070 HDAC1Q13547 482 aaPredicted RBP15.97■□□□□ 0.15
NSMCE1-208ENST00000565070 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
NSMCE1-208ENST00000565070 EP400Q96L91 3159 aa15.96■□□□□ 0.15
NSMCE1-208ENST00000565070 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-208ENST00000565070 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
NSMCE1-208ENST00000565070 ITPK1Q13572 414 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 RREB1Q92766 1687 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 CNTNAP4Q9C0A0 1308 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 TXNRD1Q16881 649 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
NSMCE1-208ENST00000565070 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
NSMCE1-208ENST00000565070 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
NSMCE1-208ENST00000565070 RGS3P49796 1198 aa15.94■□□□□ 0.14
NSMCE1-208ENST00000565070 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
NSMCE1-208ENST00000565070 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 C4BP0C0L5 1744 aa15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 MSH5O43196 834 aa15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 G2E3Q7L622 706 aa15.93■□□□□ 0.14
NSMCE1-208ENST00000565070 PTPRCP08575 1304 aa15.92■□□□□ 0.14
NSMCE1-208ENST00000565070 C8orf34Q49A92 452 aa15.92■□□□□ 0.14
NSMCE1-208ENST00000565070 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-208ENST00000565070 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
NSMCE1-208ENST00000565070 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 A1BGP04217 495 aa15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 PDIA6Q15084 440 aa15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 LRRC4BQ9NT99 713 aa15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 ANP32AP39687 249 aaKnown RBP15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 IL6STP40189 918 aaPredicted RBP15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
NSMCE1-208ENST00000565070 NBPF26B4DH59 902 aa15.9■□□□□ 0.14
NSMCE1-208ENST00000565070 MYL6BP14649 208 aa15.9■□□□□ 0.14
NSMCE1-208ENST00000565070 KCNQ4P56696 695 aa15.9■□□□□ 0.14
NSMCE1-208ENST00000565070 EN1Q05925 392 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms