RNA–Protein interactions for RNA: ENST00000564908.1

MSRB1-205, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-205ENST00000564908 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
MSRB1-205ENST00000564908 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
MSRB1-205ENST00000564908 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
MSRB1-205ENST00000564908 NEFMP07197 916 aa17.09■□□□□ 0.33
MSRB1-205ENST00000564908 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
MSRB1-205ENST00000564908 TGFB2P61812 414 aa17.09■□□□□ 0.33
MSRB1-205ENST00000564908 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
MSRB1-205ENST00000564908 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
MSRB1-205ENST00000564908 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
MSRB1-205ENST00000564908 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
MSRB1-205ENST00000564908 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
MSRB1-205ENST00000564908 A1BGP04217 495 aa17.08■□□□□ 0.32
MSRB1-205ENST00000564908 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
MSRB1-205ENST00000564908 DDR1Q08345 913 aa17.07■□□□□ 0.32
MSRB1-205ENST00000564908 NFE2L2Q16236 605 aa17.07■□□□□ 0.32
MSRB1-205ENST00000564908 ZNF784Q8NCA9 323 aaPredicted RBP17.07■□□□□ 0.32
MSRB1-205ENST00000564908 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
MSRB1-205ENST00000564908 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
MSRB1-205ENST00000564908 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
MSRB1-205ENST00000564908 PRAMEF22A3QJZ6 481 aa17.06■□□□□ 0.32
MSRB1-205ENST00000564908 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
MSRB1-205ENST00000564908 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
MSRB1-205ENST00000564908 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
MSRB1-205ENST00000564908 DPEP1P16444 411 aa17.05■□□□□ 0.32
MSRB1-205ENST00000564908 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
MSRB1-205ENST00000564908 COL15A1P39059 1388 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 A0A087WZG4 1122 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
MSRB1-205ENST00000564908 KCNA3P22001 575 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 IL6STP40189 918 aaPredicted RBP17.04■□□□□ 0.32
MSRB1-205ENST00000564908 NFIXQ14938 502 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
MSRB1-205ENST00000564908 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
MSRB1-205ENST00000564908 RIPK4P57078 832 aa17.02■□□□□ 0.32
MSRB1-205ENST00000564908 PRKRIP1Q9H875 184 aaPredicted RBP17.02■□□□□ 0.32
MSRB1-205ENST00000564908 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
MSRB1-205ENST00000564908 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
MSRB1-205ENST00000564908 SERPINB2P05120 415 aa17.01■□□□□ 0.31
MSRB1-205ENST00000564908 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
MSRB1-205ENST00000564908 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
MSRB1-205ENST00000564908 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
MSRB1-205ENST00000564908 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
MSRB1-205ENST00000564908 C10orf71Q711Q0 1435 aa17■□□□□ 0.31
MSRB1-205ENST00000564908 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
MSRB1-205ENST00000564908 BCS1LQ9Y276 419 aa17■□□□□ 0.31
MSRB1-205ENST00000564908 KIF13BQ9NQT8 1826 aa17■□□□□ 0.31
MSRB1-205ENST00000564908 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
MSRB1-205ENST00000564908 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
MSRB1-205ENST00000564908 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
MSRB1-205ENST00000564908 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
MSRB1-205ENST00000564908 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
MSRB1-205ENST00000564908 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 CAMTA2O94983 1202 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 CHRNA5P30532 468 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
MSRB1-205ENST00000564908 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
MSRB1-205ENST00000564908 CCDC146Q8IYE0 955 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
MSRB1-205ENST00000564908 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
MSRB1-205ENST00000564908 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
MSRB1-205ENST00000564908 NEUROD2Q15784 382 aa16.96■□□□□ 0.31
MSRB1-205ENST00000564908 ARHGAP27Q6ZUM4 889 aa16.96■□□□□ 0.31
MSRB1-205ENST00000564908 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
MSRB1-205ENST00000564908 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
MSRB1-205ENST00000564908 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
MSRB1-205ENST00000564908 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
MSRB1-205ENST00000564908 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
MSRB1-205ENST00000564908 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
MSRB1-205ENST00000564908 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
MSRB1-205ENST00000564908 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
MSRB1-205ENST00000564908 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
MSRB1-205ENST00000564908 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
MSRB1-205ENST00000564908 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
MSRB1-205ENST00000564908 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
MSRB1-205ENST00000564908 BABAM1Q9NWV8 329 aa16.92■□□□□ 0.3
MSRB1-205ENST00000564908 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
MSRB1-205ENST00000564908 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
MSRB1-205ENST00000564908 PRR5LQ6MZQ0 368 aa16.91■□□□□ 0.3
MSRB1-205ENST00000564908 C2CD5Q86YS7 1000 aa16.91■□□□□ 0.3
MSRB1-205ENST00000564908 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
MSRB1-205ENST00000564908 H0YIN7 160 aa16.9■□□□□ 0.3
MSRB1-205ENST00000564908 HLFQ16534 295 aa16.9■□□□□ 0.3
MSRB1-205ENST00000564908 BRCA1P38398 1863 aaKnown RBP16.89■□□□□ 0.29
MSRB1-205ENST00000564908 CHL1O00533 1208 aa16.89■□□□□ 0.29
MSRB1-205ENST00000564908 NRXN2Q9P2S2 1712 aa16.89■□□□□ 0.29
MSRB1-205ENST00000564908 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
MSRB1-205ENST00000564908 PDE6BP35913 854 aa16.88■□□□□ 0.29
MSRB1-205ENST00000564908 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
MSRB1-205ENST00000564908 TTLL6Q8N841 843 aa16.88■□□□□ 0.29
MSRB1-205ENST00000564908 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
MSRB1-205ENST00000564908 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
MSRB1-205ENST00000564908 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
MSRB1-205ENST00000564908 RGL2O15211 777 aa16.87■□□□□ 0.29
MSRB1-205ENST00000564908 MYL6BP14649 208 aa16.87■□□□□ 0.29
MSRB1-205ENST00000564908 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
MSRB1-205ENST00000564908 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
MSRB1-205ENST00000564908 NIP7Q9Y221 180 aaKnown RBP eCLIP16.87■□□□□ 0.29
MSRB1-205ENST00000564908 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms