RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SYAP1Q96A49 352 aaPredicted RBP19.62■□□□□ 0.73
LINC00554-201ENST00000564841 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
LINC00554-201ENST00000564841 CEP170BQ9Y4F5 1589 aaPredicted RBP19.62■□□□□ 0.73
LINC00554-201ENST00000564841 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
LINC00554-201ENST00000564841 HSPA2P54652 639 aa19.61■□□□□ 0.73
LINC00554-201ENST00000564841 NCBP1Q09161 790 aaKnown RBP19.61■□□□□ 0.73
LINC00554-201ENST00000564841 SLC4A10Q6U841 1118 aa19.61■□□□□ 0.73
LINC00554-201ENST00000564841 IL16Q14005 1332 aa19.61■□□□□ 0.73
LINC00554-201ENST00000564841 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
LINC00554-201ENST00000564841 KDM4AO75164 1064 aa19.6■□□□□ 0.73
LINC00554-201ENST00000564841 KNDC1Q76NI1 1749 aa19.6■□□□□ 0.73
LINC00554-201ENST00000564841 AATKQ6ZMQ8 1374 aa19.6■□□□□ 0.73
LINC00554-201ENST00000564841 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
LINC00554-201ENST00000564841 ERC2O15083 957 aa19.59■□□□□ 0.73
LINC00554-201ENST00000564841 KCNJ4P48050 445 aa19.59■□□□□ 0.73
LINC00554-201ENST00000564841 GNAI1P63096 354 aa19.59■□□□□ 0.73
LINC00554-201ENST00000564841 DIP2AQ14689 1571 aa19.58■□□□□ 0.72
LINC00554-201ENST00000564841 F6X3S4 739 aa19.58■□□□□ 0.72
LINC00554-201ENST00000564841 REC8O95072 547 aa19.58■□□□□ 0.72
LINC00554-201ENST00000564841 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.72
LINC00554-201ENST00000564841 CASC1Q6TDU7 716 aa19.58■□□□□ 0.72
LINC00554-201ENST00000564841 C16orf45Q96MC5 204 aaPredicted RBP19.58■□□□□ 0.72
LINC00554-201ENST00000564841 ABCC4O15439 1325 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 CDK12Q9NYV4 1490 aaPredicted RBP19.57■□□□□ 0.72
LINC00554-201ENST00000564841 LRMPQ12912 555 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
LINC00554-201ENST00000564841 EYA1Q99502 592 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 SRCIN1Q9C0H9 1055 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 PTGS1P23219 599 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 DIAPH3Q9NSV4 1193 aa19.57■□□□□ 0.72
LINC00554-201ENST00000564841 FIBPO43427 364 aa19.56■□□□□ 0.72
LINC00554-201ENST00000564841 TCHHQ07283 1943 aa19.56■□□□□ 0.72
LINC00554-201ENST00000564841 DDX17Q92841 729 aaKnown RBP19.56■□□□□ 0.72
LINC00554-201ENST00000564841 PHF14O94880 888 aa19.56■□□□□ 0.72
LINC00554-201ENST00000564841 UVSSAQ2YD98 709 aa19.56■□□□□ 0.72
LINC00554-201ENST00000564841 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
LINC00554-201ENST00000564841 ERICH4A6NGS2 130 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 CTIFO43310 598 aaKnown RBP19.55■□□□□ 0.72
LINC00554-201ENST00000564841 SLFN14P0C7P3 912 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 CTNNA3Q9UI47 895 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 CHMP3Q9Y3E7 222 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 MON2Q7Z3U7 1717 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
LINC00554-201ENST00000564841 FAM184AQ8NB25 1140 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 MEIS3Q99687 375 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.55■□□□□ 0.72
LINC00554-201ENST00000564841 V9GYY5 206 aaPredicted RBP19.55■□□□□ 0.72
LINC00554-201ENST00000564841 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 PTCH1Q13635 1447 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 OVOS2Q6IE36 1432 aa19.55■□□□□ 0.72
LINC00554-201ENST00000564841 MTHFSDQ2M296 383 aaKnown RBP19.54■□□□□ 0.72
LINC00554-201ENST00000564841 CCDC183Q5T5S1 534 aa19.54■□□□□ 0.72
LINC00554-201ENST00000564841 OGFRQ9NZT2 677 aa19.54■□□□□ 0.72
LINC00554-201ENST00000564841 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
LINC00554-201ENST00000564841 ANO2Q9NQ90 1003 aa19.54■□□□□ 0.72
LINC00554-201ENST00000564841 IFT57Q9NWB7 429 aa19.54■□□□□ 0.72
LINC00554-201ENST00000564841 MX1P20591 662 aa19.53■□□□□ 0.72
LINC00554-201ENST00000564841 CUL4AQ13619 759 aa19.53■□□□□ 0.72
LINC00554-201ENST00000564841 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
LINC00554-201ENST00000564841 ST7Q9NRC1 585 aa19.53■□□□□ 0.72
LINC00554-201ENST00000564841 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
LINC00554-201ENST00000564841 NRBP1Q9UHY1 535 aa19.53■□□□□ 0.72
LINC00554-201ENST00000564841 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.72
LINC00554-201ENST00000564841 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
LINC00554-201ENST00000564841 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
LINC00554-201ENST00000564841 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
LINC00554-201ENST00000564841 G2E3Q7L622 706 aa19.51■□□□□ 0.71
LINC00554-201ENST00000564841 CDK11BP21127 795 aaKnown RBP19.51■□□□□ 0.71
LINC00554-201ENST00000564841 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
LINC00554-201ENST00000564841 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
LINC00554-201ENST00000564841 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 HOXC9P31274 260 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 ZNF592Q92610 1267 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 FEZ1Q99689 392 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 IL25Q9H293 177 aa19.5■□□□□ 0.71
LINC00554-201ENST00000564841 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
LINC00554-201ENST00000564841 RILPL2Q969X0 211 aa19.49■□□□□ 0.71
LINC00554-201ENST00000564841 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
LINC00554-201ENST00000564841 FLT4P35916 1363 aa19.49■□□□□ 0.71
LINC00554-201ENST00000564841 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
LINC00554-201ENST00000564841 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
LINC00554-201ENST00000564841 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
LINC00554-201ENST00000564841 DDX41Q9UJV9 622 aaKnown RBP19.48■□□□□ 0.71
LINC00554-201ENST00000564841 EXOC6BQ9Y2D4 811 aa19.48■□□□□ 0.71
LINC00554-201ENST00000564841 PDE1AP54750 535 aa19.48■□□□□ 0.71
LINC00554-201ENST00000564841 CAMK4Q16566 473 aa19.48■□□□□ 0.71
LINC00554-201ENST00000564841 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
LINC00554-201ENST00000564841 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
LINC00554-201ENST00000564841 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
LINC00554-201ENST00000564841 NPHP1O15259 732 aa19.47■□□□□ 0.71
LINC00554-201ENST00000564841 FUCA2Q9BTY2 467 aa19.47■□□□□ 0.71
LINC00554-201ENST00000564841 LUZP1Q86V48 1076 aa19.47■□□□□ 0.71
LINC00554-201ENST00000564841 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
LINC00554-201ENST00000564841 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
LINC00554-201ENST00000564841 ESYT1Q9BSJ8 1104 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 WDR33Q9C0J8 1336 aaKnown RBP19.46■□□□□ 0.71
LINC00554-201ENST00000564841 TRIM6-TRIM34B2RNG4 842 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 TNNT1P13805 278 aa19.46■□□□□ 0.71
LINC00554-201ENST00000564841 IPO4Q8TEX9 1081 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms