RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 SCN7AQ01118 1682 aa27.05■■□□□ 1.92
COTL1-204ENST00000564662 POLRMTO00411 1230 aaKnown RBP27.05■■□□□ 1.92
COTL1-204ENST00000564662 KCNA3P22001 575 aa27.05■■□□□ 1.92
COTL1-204ENST00000564662 PIM2Q9P1W9 311 aa27.03■■□□□ 1.92
COTL1-204ENST00000564662 TTC5Q8N0Z6 440 aa27.02■■□□□ 1.92
COTL1-204ENST00000564662 SBF1O95248 1867 aa27.02■■□□□ 1.92
COTL1-204ENST00000564662 KIF3CO14782 793 aa27.01■■□□□ 1.91
COTL1-204ENST00000564662 TM4SF1P30408 202 aa27.01■■□□□ 1.91
COTL1-204ENST00000564662 CHRNA5P30532 468 aa27.01■■□□□ 1.91
COTL1-204ENST00000564662 VSIG10Q8N0Z9 540 aa27.01■■□□□ 1.91
COTL1-204ENST00000564662 DALRD3Q5D0E6 543 aaKnown RBP27■■□□□ 1.91
COTL1-204ENST00000564662 NARFQ9UHQ1 456 aa27■■□□□ 1.91
COTL1-204ENST00000564662 HSPA6P17066 643 aa26.99■■□□□ 1.91
COTL1-204ENST00000564662 TEFQ10587 303 aa26.99■■□□□ 1.91
COTL1-204ENST00000564662 GAS2L2Q8NHY3 880 aa26.99■■□□□ 1.91
COTL1-204ENST00000564662 GNAT3A8MTJ3 354 aa26.98■■□□□ 1.91
COTL1-204ENST00000564662 CANXP27824 592 aaKnown RBP26.98■■□□□ 1.91
COTL1-204ENST00000564662 NFIXQ14938 502 aa26.98■■□□□ 1.91
COTL1-204ENST00000564662 ANKRD31Q8N7Z5 1873 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 C9orf131Q5VYM1 1079 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 IL17REQ8NFR9 667 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 BCL2L12Q9HB09 334 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 BCORQ6W2J9 1755 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 HEG1Q9ULI3 1381 aa26.96■■□□□ 1.91
COTL1-204ENST00000564662 CEP350Q5VT06 3117 aa26.95■■□□□ 1.91
COTL1-204ENST00000564662 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.9
COTL1-204ENST00000564662 TNRC6CQ9HCJ0 1690 aaKnown RBP26.95■■□□□ 1.9
COTL1-204ENST00000564662 CFAP53Q96M91 514 aa26.94■■□□□ 1.9
COTL1-204ENST00000564662 COL11A2P13942 1736 aaPredicted RBP26.93■■□□□ 1.9
COTL1-204ENST00000564662 TIAM2Q8IVF5 1701 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 STARD3NLO95772 234 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 PRKAR2BP31323 418 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 ZNF790Q6PG37 636 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 NMRK2Q9NPI5 230 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 CARMIL3Q8ND23 1372 aa26.93■■□□□ 1.9
COTL1-204ENST00000564662 CCDC88AQ3V6T2 1871 aa26.92■■□□□ 1.9
COTL1-204ENST00000564662 SERPINB2P05120 415 aa26.92■■□□□ 1.9
COTL1-204ENST00000564662 ZNF330Q9Y3S2 320 aaPredicted RBP26.92■■□□□ 1.9
COTL1-204ENST00000564662 CEMIPQ8WUJ3 1361 aa26.92■■□□□ 1.9
COTL1-204ENST00000564662 CACNA1SQ13698 1873 aa26.91■■□□□ 1.9
COTL1-204ENST00000564662 BICDL1Q6ZP65 573 aa26.91■■□□□ 1.9
COTL1-204ENST00000564662 RSPH6AQ9H0K4 717 aa26.91■■□□□ 1.9
COTL1-204ENST00000564662 RNF181Q9P0P0 153 aa26.91■■□□□ 1.9
COTL1-204ENST00000564662 EIF5P55010 431 aaKnown RBP26.9■■□□□ 1.9
COTL1-204ENST00000564662 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
COTL1-204ENST00000564662 A0A087WZG4 1122 aa26.88■■□□□ 1.89
COTL1-204ENST00000564662 WDR90Q96KV7 1748 aa26.87■■□□□ 1.89
COTL1-204ENST00000564662 TOMM70O94826 608 aa26.87■■□□□ 1.89
COTL1-204ENST00000564662 RASSF7Q02833 373 aa26.87■■□□□ 1.89
COTL1-204ENST00000564662 FMNL2Q96PY5 1086 aa26.87■■□□□ 1.89
COTL1-204ENST00000564662 TEX13AQ9BXU3 409 aaPredicted RBP26.86■■□□□ 1.89
COTL1-204ENST00000564662 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
COTL1-204ENST00000564662 DLG5Q8TDM6 1919 aa26.85■■□□□ 1.89
COTL1-204ENST00000564662 BTBD11A6QL63 1104 aa26.85■■□□□ 1.89
COTL1-204ENST00000564662 PPP2R1AP30153 589 aa26.85■■□□□ 1.89
COTL1-204ENST00000564662 TBC1D9BQ66K14 1250 aa26.85■■□□□ 1.89
COTL1-204ENST00000564662 C2CD5Q86YS7 1000 aa26.85■■□□□ 1.89
COTL1-204ENST00000564662 KCNQ3O43525 872 aa26.84■■□□□ 1.89
COTL1-204ENST00000564662 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
COTL1-204ENST00000564662 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
COTL1-204ENST00000564662 TBC1D2BQ9UPU7 963 aa26.84■■□□□ 1.89
COTL1-204ENST00000564662 LAMB4A4D0S4 1761 aa26.83■■□□□ 1.89
COTL1-204ENST00000564662 KDM2BQ8NHM5 1336 aa26.83■■□□□ 1.89
COTL1-204ENST00000564662 A1BGP04217 495 aa26.82■■□□□ 1.88
COTL1-204ENST00000564662 IL6STP40189 918 aaPredicted RBP26.82■■□□□ 1.88
COTL1-204ENST00000564662 C16orf71Q8IYS4 520 aaPredicted RBP26.82■■□□□ 1.88
COTL1-204ENST00000564662 ARFGEF2Q9Y6D5 1785 aa26.81■■□□□ 1.88
COTL1-204ENST00000564662 NPM2Q86SE8 214 aaKnown RBP26.81■■□□□ 1.88
COTL1-204ENST00000564662 TTLL6Q8N841 843 aa26.81■■□□□ 1.88
COTL1-204ENST00000564662 H0YIN7 160 aa26.8■■□□□ 1.88
COTL1-204ENST00000564662 MCM10Q7L590 875 aa26.8■■□□□ 1.88
COTL1-204ENST00000564662 FER1L6Q2WGJ9 1857 aa26.8■■□□□ 1.88
COTL1-204ENST00000564662 APLP1P51693 650 aa26.79■■□□□ 1.88
COTL1-204ENST00000564662 CCDC24Q8N4L8 307 aa26.79■■□□□ 1.88
COTL1-204ENST00000564662 RTF1Q92541 710 aaKnown RBP26.79■■□□□ 1.88
COTL1-204ENST00000564662 DICER1Q9UPY3 1922 aaKnown RBP26.78■■□□□ 1.88
COTL1-204ENST00000564662 PIP4K2AP48426 406 aaPredicted RBP26.78■■□□□ 1.88
COTL1-204ENST00000564662 CAMTA2O94983 1202 aa26.77■■□□□ 1.88
COTL1-204ENST00000564662 PRR5LQ6MZQ0 368 aa26.77■■□□□ 1.88
COTL1-204ENST00000564662 RBM46Q8TBY0 533 aaKnown RBP26.77■■□□□ 1.88
COTL1-204ENST00000564662 PRAMEF22A3QJZ6 481 aa26.76■■□□□ 1.87
COTL1-204ENST00000564662 DZIP3Q86Y13 1208 aaKnown RBP26.76■■□□□ 1.87
COTL1-204ENST00000564662 USP16Q9Y5T5 823 aa26.76■■□□□ 1.87
COTL1-204ENST00000564662 KDM3BQ7LBC6 1761 aa26.76■■□□□ 1.87
COTL1-204ENST00000564662 ZC3H4Q9UPT8 1303 aaKnown RBP26.75■■□□□ 1.87
COTL1-204ENST00000564662 NPHP1O15259 732 aa26.75■■□□□ 1.87
COTL1-204ENST00000564662 LMNB1P20700 586 aa26.75■■□□□ 1.87
COTL1-204ENST00000564662 PRELPP51888 382 aa26.75■■□□□ 1.87
COTL1-204ENST00000564662 DCTN1Q14203 1278 aa26.75■■□□□ 1.87
COTL1-204ENST00000564662 ZNF622Q969S3 477 aaKnown RBP eCLIP26.75■■□□□ 1.87
COTL1-204ENST00000564662 RRAGCQ9HB90 399 aa26.75■■□□□ 1.87
COTL1-204ENST00000564662 SLX4Q8IY92 1834 aa26.74■■□□□ 1.87
COTL1-204ENST00000564662 PDE6BP35913 854 aa26.74■■□□□ 1.87
COTL1-204ENST00000564662 CNBD1Q8NA66 436 aa26.74■■□□□ 1.87
COTL1-204ENST00000564662 NFKBIEO00221 500 aa26.73■■□□□ 1.87
COTL1-204ENST00000564662 SETDB2Q96T68 719 aa26.73■■□□□ 1.87
COTL1-204ENST00000564662 BRIP1Q9BX63 1249 aa26.73■■□□□ 1.87
COTL1-204ENST00000564662 ZNF219Q9P2Y4 722 aaPredicted RBP26.73■■□□□ 1.87
COTL1-204ENST00000564662 SNRPA1P09661 255 aaKnown RBP26.7■■□□□ 1.86
COTL1-204ENST00000564662 ST5P78524 1137 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms