RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	SLC52A2	Q9HAB3	445 aa		33.9	■■■■□ 3.02
CYLD-208	ENST00000564634	MRC1	P22897	1456 aa		33.89	■■■■□ 3.02
CYLD-208	ENST00000564634	LGR6	Q9HBX8	967 aa		33.89	■■■■□ 3.02
CYLD-208	ENST00000564634	VIRMA	Q69YN4	1812 aa	Known RBP	33.88	■■■■□ 3.01
CYLD-208	ENST00000564634	TM4SF1	P30408	202 aa		33.88	■■■■□ 3.01
CYLD-208	ENST00000564634	SLC39A6	Q13433	755 aa		33.88	■■■■□ 3.01
CYLD-208	ENST00000564634	DIAPH1	O60610	1272 aa	Known RBP	33.87	■■■■□ 3.01
CYLD-208	ENST00000564634	HTRA3	P83110	453 aa		33.87	■■■■□ 3.01
CYLD-208	ENST00000564634	KDM2B	Q8NHM5	1336 aa		33.86	■■■■□ 3.01
CYLD-208	ENST00000564634	HMOX1	P09601	288 aa		33.86	■■■■□ 3.01
CYLD-208	ENST00000564634	DDX10	Q13206	875 aa	Known RBP	33.85	■■■■□ 3.01
CYLD-208	ENST00000564634	AFDN	P55196	1824 aa	Known RBP	33.85	■■■■□ 3.01
CYLD-208	ENST00000564634	COL15A1	P39059	1388 aa		33.85	■■■■□ 3.01
CYLD-208	ENST00000564634	SBF1	O95248	1867 aa		33.84	■■■■□ 3.01
CYLD-208	ENST00000564634	TNRC6C	Q9HCJ0	1690 aa	Known RBP	33.84	■■■■□ 3.01
CYLD-208	ENST00000564634	RNMT	O43148	476 aa	Known RBP	33.84	■■■■□ 3.01
CYLD-208	ENST00000564634	CYP19A1	P11511	503 aa	Predicted RBP	33.84	■■■■□ 3.01
CYLD-208	ENST00000564634	RASSF7	Q02833	373 aa		33.84	■■■■□ 3.01
CYLD-208	ENST00000564634	PPP2R1A	P30153	589 aa		33.82	■■■■□ 3
CYLD-208	ENST00000564634	NFIX	Q14938	502 aa		33.82	■■■■□ 3
CYLD-208	ENST00000564634	RRAGC	Q9HB90	399 aa		33.82	■■■■□ 3
CYLD-208	ENST00000564634	ZBTB1	Q9Y2K1	713 aa		33.82	■■■■□ 3
CYLD-208	ENST00000564634	CFAP53	Q96M91	514 aa		33.8	■■■■□ 3
CYLD-208	ENST00000564634	NRXN2	Q9P2S2	1712 aa		33.79	■■■■□ 3
CYLD-208	ENST00000564634	FSTL1	Q12841	308 aa		33.79	■■■■□ 3
CYLD-208	ENST00000564634	NARF	Q9UHQ1	456 aa		33.79	■■■■□ 3
CYLD-208	ENST00000564634	COL3A1	P02461	1466 aa	Predicted RBP	33.78	■■■■□ 3
CYLD-208	ENST00000564634	DLEC1	Q9Y238	1755 aa		33.77	■■■■□ 3
CYLD-208	ENST00000564634	MTHFSD	Q2M296	383 aa	Known RBP	33.77	■■■■□ 3
CYLD-208	ENST00000564634	BCL2L12	Q9HB09	334 aa		33.76	■■■□□ 2.99
CYLD-208	ENST00000564634	KLRG1	Q96E93	195 aa		33.75	■■■□□ 2.99
CYLD-208	ENST00000564634	UBR2	Q8IWV8	1755 aa		33.75	■■■□□ 2.99
CYLD-208	ENST00000564634	CARMIL3	Q8ND23	1372 aa		33.74	■■■□□ 2.99
CYLD-208	ENST00000564634	SERPINB2	P05120	415 aa		33.74	■■■□□ 2.99
CYLD-208	ENST00000564634	CANX	P27824	592 aa	Known RBP	33.72	■■■□□ 2.99
CYLD-208	ENST00000564634	TIAM2	Q8IVF5	1701 aa		33.72	■■■□□ 2.99
CYLD-208	ENST00000564634	U2SURP	O15042	1029 aa	Known RBP	33.71	■■■□□ 2.99
CYLD-208	ENST00000564634	BICDL1	Q6ZP65	573 aa		33.71	■■■□□ 2.99
CYLD-208	ENST00000564634	PRELP	P51888	382 aa		33.7	■■■□□ 2.99
CYLD-208	ENST00000564634	C2CD5	Q86YS7	1000 aa		33.7	■■■□□ 2.99
CYLD-208	ENST00000564634	LMNB1	P20700	586 aa		33.69	■■■□□ 2.98
CYLD-208	ENST00000564634	SMC1B	Q8NDV3	1235 aa		33.69	■■■□□ 2.98
CYLD-208	ENST00000564634	NUDC	Q9Y266	331 aa		33.69	■■■□□ 2.98
CYLD-208	ENST00000564634	RALBP1	Q15311	655 aa		33.68	■■■□□ 2.98
CYLD-208	ENST00000564634	VSIG10	Q8N0Z9	540 aa		33.68	■■■□□ 2.98
CYLD-208	ENST00000564634	TTLL6	Q8N841	843 aa		33.68	■■■□□ 2.98
CYLD-208	ENST00000564634	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.68	■■■□□ 2.98
CYLD-208	ENST00000564634	TTC5	Q8N0Z6	440 aa		33.66	■■■□□ 2.98
CYLD-208	ENST00000564634	JMY	Q8N9B5	988 aa		33.65	■■■□□ 2.98
CYLD-208	ENST00000564634	SCN7A	Q01118	1682 aa		33.64	■■■□□ 2.98
CYLD-208	ENST00000564634		H0YIN7	160 aa		33.64	■■■□□ 2.98
CYLD-208	ENST00000564634	CCDC88A	Q3V6T2	1871 aa		33.64	■■■□□ 2.98
CYLD-208	ENST00000564634	ANKRD31	Q8N7Z5	1873 aa		33.63	■■■□□ 2.97
CYLD-208	ENST00000564634	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.63	■■■□□ 2.97
CYLD-208	ENST00000564634	GLTPD2	A6NH11	291 aa		33.62	■■■□□ 2.97
CYLD-208	ENST00000564634	NFKBIE	O00221	500 aa		33.62	■■■□□ 2.97
CYLD-208	ENST00000564634	STARD3NL	O95772	234 aa		33.62	■■■□□ 2.97
CYLD-208	ENST00000564634	EIF5	P55010	431 aa	Known RBP	33.62	■■■□□ 2.97
CYLD-208	ENST00000564634	TBC1D9B	Q66K14	1250 aa		33.61	■■■□□ 2.97
CYLD-208	ENST00000564634	COL11A2	P13942	1736 aa	Predicted RBP	33.61	■■■□□ 2.97
CYLD-208	ENST00000564634	PCNT	O95613	3336 aa		33.61	■■■□□ 2.97
CYLD-208	ENST00000564634	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.6	■■■□□ 2.97
CYLD-208	ENST00000564634	ZNF496	Q96IT1	587 aa	Predicted RBP	33.6	■■■□□ 2.97
CYLD-208	ENST00000564634	VEGFA	P15692	232 aa	Predicted RBP	33.59	■■■□□ 2.97
CYLD-208	ENST00000564634	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.59	■■■□□ 2.97
CYLD-208	ENST00000564634	CCDC24	Q8N4L8	307 aa		33.59	■■■□□ 2.97
CYLD-208	ENST00000564634	ZNF219	Q9P2Y4	722 aa	Predicted RBP	33.59	■■■□□ 2.97
CYLD-208	ENST00000564634	HEG1	Q9ULI3	1381 aa		33.59	■■■□□ 2.97
CYLD-208	ENST00000564634		A0A087WZG4	1122 aa		33.58	■■■□□ 2.97
CYLD-208	ENST00000564634	ZNF622	Q969S3	477 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
CYLD-208	ENST00000564634	SIPA1L3	O60292	1781 aa	Predicted RBP	33.57	■■■□□ 2.97
CYLD-208	ENST00000564634	TEF	Q10587	303 aa		33.57	■■■□□ 2.96
CYLD-208	ENST00000564634	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.56	■■■□□ 2.96
CYLD-208	ENST00000564634	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.56	■■■□□ 2.96
CYLD-208	ENST00000564634	TBC1D2B	Q9UPU7	963 aa		33.56	■■■□□ 2.96
CYLD-208	ENST00000564634	ZNF790	Q6PG37	636 aa		33.55	■■■□□ 2.96
CYLD-208	ENST00000564634	IL17RE	Q8NFR9	667 aa		33.55	■■■□□ 2.96
CYLD-208	ENST00000564634	RSPH6A	Q9H0K4	717 aa		33.54	■■■□□ 2.96
CYLD-208	ENST00000564634	GNAT3	A8MTJ3	354 aa		33.53	■■■□□ 2.96
CYLD-208	ENST00000564634	C21orf2	O43822	256 aa		33.53	■■■□□ 2.96
CYLD-208	ENST00000564634	PRR5L	Q6MZQ0	368 aa		33.53	■■■□□ 2.96
CYLD-208	ENST00000564634	GAS2L2	Q8NHY3	880 aa		33.52	■■■□□ 2.96
CYLD-208	ENST00000564634	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.52	■■■□□ 2.96
CYLD-208	ENST00000564634	PRKAR2B	P31323	418 aa		33.51	■■■□□ 2.95
CYLD-208	ENST00000564634	PDE6B	P35913	854 aa		33.51	■■■□□ 2.95
CYLD-208	ENST00000564634	BRIP1	Q9BX63	1249 aa		33.51	■■■□□ 2.95
CYLD-208	ENST00000564634	CACNA1S	Q13698	1873 aa		33.5	■■■□□ 2.95
CYLD-208	ENST00000564634	FER1L6	Q2WGJ9	1857 aa		33.5	■■■□□ 2.95
CYLD-208	ENST00000564634	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.49	■■■□□ 2.95
CYLD-208	ENST00000564634	POTEC	B2RU33	542 aa		33.48	■■■□□ 2.95
CYLD-208	ENST00000564634	NPHP1	O15259	732 aa		33.48	■■■□□ 2.95
CYLD-208	ENST00000564634	CAPN15	O75808	1086 aa		33.48	■■■□□ 2.95
CYLD-208	ENST00000564634	A1BG	P04217	495 aa		33.48	■■■□□ 2.95
CYLD-208	ENST00000564634	IL6ST	P40189	918 aa	Predicted RBP	33.48	■■■□□ 2.95
CYLD-208	ENST00000564634	ERFE	Q4G0M1	354 aa		33.47	■■■□□ 2.95
CYLD-208	ENST00000564634	FMNL2	Q96PY5	1086 aa		33.47	■■■□□ 2.95
CYLD-208	ENST00000564634	DICER1	Q9UPY3	1922 aa	Known RBP	33.47	■■■□□ 2.95
CYLD-208	ENST00000564634	BCOR	Q6W2J9	1755 aa		33.47	■■■□□ 2.95
CYLD-208	ENST00000564634	DPY19L2	Q6NUT2	758 aa		33.46	■■■□□ 2.95
CYLD-208	ENST00000564634	CNBD1	Q8NA66	436 aa		33.46	■■■□□ 2.95

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms