RNA–Protein interactions for RNA: ENST00000564531.1

AC025259.3-201, humanhuman

TSL 3 BASIC

Gene AC025259.3, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.3-201ENST00000564531 TMEM57Q8N5G2 664 aa22.65■■□□□ 1.22
AC025259.3-201ENST00000564531 CHPF2Q9P2E5 772 aa22.65■■□□□ 1.22
AC025259.3-201ENST00000564531 RGS12O14924 1447 aa22.65■■□□□ 1.22
AC025259.3-201ENST00000564531 ITGB4P16144 1822 aa22.64■■□□□ 1.22
AC025259.3-201ENST00000564531 CCT4P50991 539 aaKnown RBP22.64■■□□□ 1.21
AC025259.3-201ENST00000564531 FKBP5Q13451 457 aaPredicted RBP22.64■■□□□ 1.21
AC025259.3-201ENST00000564531 INTS3Q68E01 1043 aaKnown RBP22.64■■□□□ 1.21
AC025259.3-201ENST00000564531 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
AC025259.3-201ENST00000564531 TNNQ9UQP3 1299 aa22.64■■□□□ 1.21
AC025259.3-201ENST00000564531 PRIM1P49642 420 aaKnown RBP22.63■■□□□ 1.21
AC025259.3-201ENST00000564531 C5P01031 1676 aa22.62■■□□□ 1.21
AC025259.3-201ENST00000564531 DDX58O95786 925 aaKnown RBP22.62■■□□□ 1.21
AC025259.3-201ENST00000564531 SMARCC1Q92922 1105 aaPredicted RBP22.62■■□□□ 1.21
AC025259.3-201ENST00000564531 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
AC025259.3-201ENST00000564531 ATG3Q9NT62 314 aa22.62■■□□□ 1.21
AC025259.3-201ENST00000564531 B4GALNT3Q6L9W6 998 aa22.61■■□□□ 1.21
AC025259.3-201ENST00000564531 G2E3Q7L622 706 aa22.61■■□□□ 1.21
AC025259.3-201ENST00000564531 ASAP1Q9ULH1 1129 aa22.59■■□□□ 1.21
AC025259.3-201ENST00000564531 PTCD1O75127 700 aaKnown RBP22.58■■□□□ 1.21
AC025259.3-201ENST00000564531 STARD3NLO95772 234 aa22.58■■□□□ 1.21
AC025259.3-201ENST00000564531 SEPT12Q8IYM1 358 aa22.58■■□□□ 1.21
AC025259.3-201ENST00000564531 PRAMEF22A3QJZ6 481 aa22.57■■□□□ 1.2
AC025259.3-201ENST00000564531 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
AC025259.3-201ENST00000564531 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
AC025259.3-201ENST00000564531 PHAXQ9H814 394 aaKnown RBP22.56■■□□□ 1.2
AC025259.3-201ENST00000564531 ZBTB40Q9NUA8 1239 aa22.56■■□□□ 1.2
AC025259.3-201ENST00000564531 PDIA6Q15084 440 aa22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 CENPQQ7L2Z9 268 aaPredicted RBP22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 RBM42Q9BTD8 480 aaKnown RBP22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 ATP10DQ9P241 1426 aa22.55■■□□□ 1.2
AC025259.3-201ENST00000564531 ZBTB7BO15156 539 aaPredicted RBP22.54■■□□□ 1.2
AC025259.3-201ENST00000564531 KSR2Q6VAB6 950 aa22.54■■□□□ 1.2
AC025259.3-201ENST00000564531 DNAAF4Q8WXU2 420 aa22.54■■□□□ 1.2
AC025259.3-201ENST00000564531 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
AC025259.3-201ENST00000564531 NHSQ6T4R5 1651 aa22.54■■□□□ 1.2
AC025259.3-201ENST00000564531 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
AC025259.3-201ENST00000564531 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
AC025259.3-201ENST00000564531 PROSER3Q2NL68 480 aa22.52■■□□□ 1.2
AC025259.3-201ENST00000564531 RWDD1Q9H446 243 aaPredicted RBP22.52■■□□□ 1.2
AC025259.3-201ENST00000564531 PALLDQ8WX93 1383 aa22.51■■□□□ 1.19
AC025259.3-201ENST00000564531 F6X3S4 739 aa22.51■■□□□ 1.19
AC025259.3-201ENST00000564531 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
AC025259.3-201ENST00000564531 ZNF831Q5JPB2 1677 aa22.51■■□□□ 1.19
AC025259.3-201ENST00000564531 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 GNAI3P08754 354 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 MYL6BP14649 208 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 HDAC5Q9UQL6 1122 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 ADCY9O60503 1353 aa22.5■■□□□ 1.19
AC025259.3-201ENST00000564531 ALDH1L1O75891 902 aa22.49■■□□□ 1.19
AC025259.3-201ENST00000564531 ANXA1P04083 346 aa22.49■■□□□ 1.19
AC025259.3-201ENST00000564531 DNAJC10Q8IXB1 793 aa22.49■■□□□ 1.19
AC025259.3-201ENST00000564531 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
AC025259.3-201ENST00000564531 NEXNQ0ZGT2 675 aa22.48■■□□□ 1.19
AC025259.3-201ENST00000564531 FAM196AQ6ZSG2 479 aa22.48■■□□□ 1.19
AC025259.3-201ENST00000564531 KRT27Q7Z3Y8 459 aa22.48■■□□□ 1.19
AC025259.3-201ENST00000564531 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
AC025259.3-201ENST00000564531 KDM2BQ8NHM5 1336 aa22.48■■□□□ 1.19
AC025259.3-201ENST00000564531 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 SIK1P57059 783 aa22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 HDAC1Q13547 482 aaPredicted RBP22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 RIC3Q7Z5B4 369 aa22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 MAP3K2Q9Y2U5 619 aa22.47■■□□□ 1.19
AC025259.3-201ENST00000564531 TJP1Q07157 1748 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 CYP19A1P11511 503 aaPredicted RBP22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 HMGB2P26583 209 aaKnown RBP22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 RXRBP28702 533 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 ANKRD13DQ6ZTN6 518 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 LINS1Q8NG48 757 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 PLBD2Q8NHP8 589 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 PCDHB15Q9Y5E8 787 aa22.46■■□□□ 1.19
AC025259.3-201ENST00000564531 NBPF26B4DH59 902 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 KCNQ2O43526 872 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 A1BGP04217 495 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 AIMP1Q12904 312 aaKnown RBP22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 BEND3Q5T5X7 828 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 NBPF10Q6P3W6 841 aaKnown RBP22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 NBPF15Q8N660 670 aa22.45■■□□□ 1.18
AC025259.3-201ENST00000564531 ATP6V1AP38606 617 aa22.44■■□□□ 1.18
AC025259.3-201ENST00000564531 NPM2Q86SE8 214 aaKnown RBP22.44■■□□□ 1.18
AC025259.3-201ENST00000564531 RPAP2Q8IXW5 612 aaPredicted RBP22.44■■□□□ 1.18
AC025259.3-201ENST00000564531 BCL11BQ9C0K0 894 aaPredicted RBP22.44■■□□□ 1.18
AC025259.3-201ENST00000564531 SLC4A9Q96Q91 983 aa22.43■■□□□ 1.18
AC025259.3-201ENST00000564531 METTL22Q9BUU2 404 aaPredicted RBP22.43■■□□□ 1.18
AC025259.3-201ENST00000564531 GNAI2P04899 355 aa22.42■■□□□ 1.18
AC025259.3-201ENST00000564531 IL6STP40189 918 aaPredicted RBP22.42■■□□□ 1.18
AC025259.3-201ENST00000564531 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
AC025259.3-201ENST00000564531 MEIS3Q99687 375 aa22.42■■□□□ 1.18
AC025259.3-201ENST00000564531 UBTFL1P0CB47 393 aaPredicted RBP22.41■■□□□ 1.18
AC025259.3-201ENST00000564531 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
AC025259.3-201ENST00000564531 BTAF1O14981 1849 aa22.41■■□□□ 1.18
AC025259.3-201ENST00000564531 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
AC025259.3-201ENST00000564531 HMMRO75330 724 aa22.4■■□□□ 1.18
AC025259.3-201ENST00000564531 RREB1Q92766 1687 aa22.39■■□□□ 1.18
AC025259.3-201ENST00000564531 SBF2Q86WG5 1849 aa22.38■■□□□ 1.17
AC025259.3-201ENST00000564531 ANKRD44Q8N8A2 993 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms