RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 FLAD1Q8NFF5 587 aa10.99□□□□□ -0.65
NSMCE1-207ENST00000564342 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
NSMCE1-207ENST00000564342 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 PTCD1O75127 700 aaKnown RBP10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 SSFA2P28290 1259 aa10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 ARXQ96QS3 562 aa10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 CEMIPQ8WUJ3 1361 aa10.98□□□□□ -0.65
NSMCE1-207ENST00000564342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 GNPATO15228 680 aa10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 PHF14O94880 888 aa10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
NSMCE1-207ENST00000564342 POLD1P28340 1107 aa10.96□□□□□ -0.65
NSMCE1-207ENST00000564342 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.65
NSMCE1-207ENST00000564342 TEFQ10587 303 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 MSL1Q68DK7 614 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 DNAJC10Q8IXB1 793 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
NSMCE1-207ENST00000564342 RPS6KA4O75676 772 aa10.94□□□□□ -0.66
NSMCE1-207ENST00000564342 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-207ENST00000564342 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-207ENST00000564342 PRKRIP1Q9H875 184 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-207ENST00000564342 RTCBQ9Y3I0 505 aaKnown RBP10.94□□□□□ -0.66
NSMCE1-207ENST00000564342 KDM3BQ7LBC6 1761 aa10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 CRKLP46109 303 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 TRAPPC3LQ5T215 181 aa10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 MCM10Q7L590 875 aa10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
NSMCE1-207ENST00000564342 HEG1Q9ULI3 1381 aa10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 CYP19A1P11511 503 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 ZNF790Q6PG37 636 aa10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 TTC5Q8N0Z6 440 aa10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 ZNF496Q96IT1 587 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-207ENST00000564342 KIF13BQ9NQT8 1826 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 BTBD11A6QL63 1104 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 KCNQ3O43525 872 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 NEFMP07197 916 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 NFE2L2Q16236 605 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 PNNQ9H307 717 aaKnown RBP10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
NSMCE1-207ENST00000564342 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 SOS1Q07889 1333 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 MAPK8IP3Q9UPT6 1336 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 KIAA1551Q9HCM1 1747 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 NLGN2Q8NFZ4 835 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 ZBTB1Q9Y2K1 713 aa10.9□□□□□ -0.66
NSMCE1-207ENST00000564342 GYS1P13807 737 aa10.89□□□□□ -0.67
NSMCE1-207ENST00000564342 RFC4P35249 363 aa10.89□□□□□ -0.67
NSMCE1-207ENST00000564342 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
NSMCE1-207ENST00000564342 SCN7AQ01118 1682 aa10.89□□□□□ -0.67
NSMCE1-207ENST00000564342 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 MMP10P09238 476 aa10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 NLGN1Q8N2Q7 840 aa10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 COL15A1P39059 1388 aa10.88□□□□□ -0.67
NSMCE1-207ENST00000564342 STARD3NLO95772 234 aa10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 TAF7Q15545 349 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 THUMPD2Q9BTF0 503 aaKnown RBP10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 TEX13AQ9BXU3 409 aaPredicted RBP10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 CHD4Q14839 1912 aa10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 BCORQ6W2J9 1755 aa10.87□□□□□ -0.67
NSMCE1-207ENST00000564342 AFDNP55196 1824 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 PRAMEF22A3QJZ6 481 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 TMPOP42166 694 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 FKBP8Q14318 412 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 NARFQ9UHQ1 456 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 ADAMTS8Q9UP79 889 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
NSMCE1-207ENST00000564342 C10orf71Q711Q0 1435 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 RIPK4P57078 832 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 USPL1Q5W0Q7 1092 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 RUNDC1Q96C34 613 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 MIS18AQ9NYP9 233 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 BRCA1P38398 1863 aaKnown RBP10.85□□□□□ -0.67
NSMCE1-207ENST00000564342 A1BGP04217 495 aa10.84□□□□□ -0.67
NSMCE1-207ENST00000564342 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
NSMCE1-207ENST00000564342 IL6STP40189 918 aaPredicted RBP10.84□□□□□ -0.67
NSMCE1-207ENST00000564342 DDR1Q08345 913 aa10.84□□□□□ -0.67
NSMCE1-207ENST00000564342 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms