RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
UBFD1-203ENST00000564106 WDR63Q8IWG1 891 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
UBFD1-203ENST00000564106 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
UBFD1-203ENST00000564106 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
UBFD1-203ENST00000564106 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
UBFD1-203ENST00000564106 DLG5Q8TDM6 1919 aa12.66□□□□□ -0.38
UBFD1-203ENST00000564106 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
UBFD1-203ENST00000564106 DDR1Q08345 913 aa12.66□□□□□ -0.38
UBFD1-203ENST00000564106 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
UBFD1-203ENST00000564106 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
UBFD1-203ENST00000564106 AFDNP55196 1824 aaKnown RBP12.65□□□□□ -0.38
UBFD1-203ENST00000564106 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
UBFD1-203ENST00000564106 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 LMOD3Q0VAK6 560 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 FKBP8Q14318 412 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 RTCBQ9Y3I0 505 aaKnown RBP12.65□□□□□ -0.38
UBFD1-203ENST00000564106 ADCY9O60503 1353 aa12.65□□□□□ -0.38
UBFD1-203ENST00000564106 IL16Q14005 1332 aa12.64□□□□□ -0.39
UBFD1-203ENST00000564106 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
UBFD1-203ENST00000564106 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
UBFD1-203ENST00000564106 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
UBFD1-203ENST00000564106 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
UBFD1-203ENST00000564106 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
UBFD1-203ENST00000564106 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
UBFD1-203ENST00000564106 KCNQ3O43525 872 aa12.63□□□□□ -0.39
UBFD1-203ENST00000564106 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
UBFD1-203ENST00000564106 DUSP27Q5VZP5 1158 aa12.63□□□□□ -0.39
UBFD1-203ENST00000564106 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
UBFD1-203ENST00000564106 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
UBFD1-203ENST00000564106 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
UBFD1-203ENST00000564106 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
UBFD1-203ENST00000564106 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
UBFD1-203ENST00000564106 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 KCNA3P22001 575 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 NFE2L2Q16236 605 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
UBFD1-203ENST00000564106 DPEP1P16444 411 aa12.61□□□□□ -0.39
UBFD1-203ENST00000564106 RIPK4P57078 832 aa12.61□□□□□ -0.39
UBFD1-203ENST00000564106 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 PRAMEF22A3QJZ6 481 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-203ENST00000564106 ADRA2BP18089 450 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 RFC4P35249 363 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
UBFD1-203ENST00000564106 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
UBFD1-203ENST00000564106 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
UBFD1-203ENST00000564106 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
UBFD1-203ENST00000564106 COL15A1P39059 1388 aa12.59□□□□□ -0.39
UBFD1-203ENST00000564106 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
UBFD1-203ENST00000564106 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
UBFD1-203ENST00000564106 ARFGEF1Q9Y6D6 1849 aa12.59□□□□□ -0.39
UBFD1-203ENST00000564106 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
UBFD1-203ENST00000564106 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
UBFD1-203ENST00000564106 TM4SF1P30408 202 aa12.58□□□□□ -0.4
UBFD1-203ENST00000564106 CHRNA5P30532 468 aa12.58□□□□□ -0.4
UBFD1-203ENST00000564106 RRP1P56182 461 aaKnown RBP12.58□□□□□ -0.4
UBFD1-203ENST00000564106 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
UBFD1-203ENST00000564106 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
UBFD1-203ENST00000564106 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
UBFD1-203ENST00000564106 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
UBFD1-203ENST00000564106 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
UBFD1-203ENST00000564106 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
UBFD1-203ENST00000564106 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
UBFD1-203ENST00000564106 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
UBFD1-203ENST00000564106 NFIXQ14938 502 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 MCM10Q7L590 875 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 GAS2L2Q8NHY3 880 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
UBFD1-203ENST00000564106 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
UBFD1-203ENST00000564106 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
UBFD1-203ENST00000564106 ZNF790Q6PG37 636 aa12.55□□□□□ -0.4
UBFD1-203ENST00000564106 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
UBFD1-203ENST00000564106 KDM3BQ7LBC6 1761 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 A1BGP04217 495 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
UBFD1-203ENST00000564106 PRELPP51888 382 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 GNAI1P63096 354 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 SBF1O95248 1867 aa12.54□□□□□ -0.4
UBFD1-203ENST00000564106 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
UBFD1-203ENST00000564106 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
UBFD1-203ENST00000564106 TGFB2P61812 414 aa12.53□□□□□ -0.4
UBFD1-203ENST00000564106 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms