RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
MAP1LC3B-204ENST00000563720 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
MAP1LC3B-204ENST00000563720 CRKLP46109 303 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3B-204ENST00000563720 DALRD3Q5D0E6 543 aaKnown RBP23.32■■□□□ 1.32
MAP1LC3B-204ENST00000563720 KDM2BQ8NHM5 1336 aa23.32■■□□□ 1.32
MAP1LC3B-204ENST00000563720 GNAT3A8MTJ3 354 aa23.31■■□□□ 1.32
MAP1LC3B-204ENST00000563720 HTRA3P83110 453 aa23.31■■□□□ 1.32
MAP1LC3B-204ENST00000563720 FSTL1Q12841 308 aa23.31■■□□□ 1.32
MAP1LC3B-204ENST00000563720 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
MAP1LC3B-204ENST00000563720 RNF181Q9P0P0 153 aa23.31■■□□□ 1.32
MAP1LC3B-204ENST00000563720 DLG5Q8TDM6 1919 aa23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 U2AF1L5P0DN76 240 aaPredicted RBP23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 U2AF1Q01081 240 aaKnown RBP eCLIP23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 DNAJC10Q8IXB1 793 aa23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 KLRG1Q96E93 195 aa23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 SRP68Q9UHB9 627 aaKnown RBP23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 WDR90Q96KV7 1748 aa23.3■■□□□ 1.32
MAP1LC3B-204ENST00000563720 BRCA1P38398 1863 aaKnown RBP23.29■■□□□ 1.32
MAP1LC3B-204ENST00000563720 FKBP8Q14318 412 aa23.28■■□□□ 1.32
MAP1LC3B-204ENST00000563720 INTS5Q6P9B9 1019 aaKnown RBP23.28■■□□□ 1.32
MAP1LC3B-204ENST00000563720 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
MAP1LC3B-204ENST00000563720 ARFGEF1Q9Y6D6 1849 aa23.27■■□□□ 1.32
MAP1LC3B-204ENST00000563720 RRAGCQ9HB90 399 aa23.27■■□□□ 1.32
MAP1LC3B-204ENST00000563720 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3B-204ENST00000563720 DDR1Q08345 913 aa23.26■■□□□ 1.31
MAP1LC3B-204ENST00000563720 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
MAP1LC3B-204ENST00000563720 CHRNA5P30532 468 aa23.25■■□□□ 1.31
MAP1LC3B-204ENST00000563720 TEFQ10587 303 aa23.25■■□□□ 1.31
MAP1LC3B-204ENST00000563720 VSIG10Q8N0Z9 540 aa23.25■■□□□ 1.31
MAP1LC3B-204ENST00000563720 JMYQ8N9B5 988 aa23.24■■□□□ 1.31
MAP1LC3B-204ENST00000563720 COL13A1Q5TAT6 717 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-204ENST00000563720 SOS1Q07889 1333 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3B-204ENST00000563720 ZNF790Q6PG37 636 aa23.22■■□□□ 1.31
MAP1LC3B-204ENST00000563720 TTC5Q8N0Z6 440 aa23.22■■□□□ 1.31
MAP1LC3B-204ENST00000563720 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
MAP1LC3B-204ENST00000563720 ZPR1O75312 459 aa23.21■■□□□ 1.31
MAP1LC3B-204ENST00000563720 SMC1BQ8NDV3 1235 aa23.21■■□□□ 1.31
MAP1LC3B-204ENST00000563720 ZNF496Q96IT1 587 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3B-204ENST00000563720 ZBTB1Q9Y2K1 713 aa23.2■■□□□ 1.3
MAP1LC3B-204ENST00000563720 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
MAP1LC3B-204ENST00000563720 HEG1Q9ULI3 1381 aa23.19■■□□□ 1.3
MAP1LC3B-204ENST00000563720 TM4SF1P30408 202 aa23.19■■□□□ 1.3
MAP1LC3B-204ENST00000563720 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
MAP1LC3B-204ENST00000563720 USPL1Q5W0Q7 1092 aa23.18■■□□□ 1.3
MAP1LC3B-204ENST00000563720 COL15A1P39059 1388 aa23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 TNRC6CQ9HCJ0 1690 aaKnown RBP23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 CAPN15O75808 1086 aa23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 RASSF7Q02833 373 aa23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 RALBP1Q15311 655 aa23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 MCM10Q7L590 875 aa23.17■■□□□ 1.3
MAP1LC3B-204ENST00000563720 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
MAP1LC3B-204ENST00000563720 KCNQ3O43525 872 aa23.16■■□□□ 1.3
MAP1LC3B-204ENST00000563720 ZC3H4Q9UPT8 1303 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3B-204ENST00000563720 TNS4Q8IZW8 715 aa23.15■■□□□ 1.3
MAP1LC3B-204ENST00000563720 RTF1Q92541 710 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3B-204ENST00000563720 NRXN2Q9P2S2 1712 aa23.14■■□□□ 1.3
MAP1LC3B-204ENST00000563720 HTATSF1O43719 755 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 STARD3NLO95772 234 aa23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 DCTN1Q14203 1278 aa23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 FMNL2Q96PY5 1086 aa23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
MAP1LC3B-204ENST00000563720 SBF1O95248 1867 aa23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 SCN7AQ01118 1682 aa23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 VEGFAP15692 232 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 LMNB1P20700 586 aa23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 KDM3BQ7LBC6 1761 aa23.13■■□□□ 1.29
MAP1LC3B-204ENST00000563720 GLTPD2A6NH11 291 aa23.12■■□□□ 1.29
MAP1LC3B-204ENST00000563720 NFIXQ14938 502 aa23.12■■□□□ 1.29
MAP1LC3B-204ENST00000563720 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3B-204ENST00000563720 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
MAP1LC3B-204ENST00000563720 LAMB4A4D0S4 1761 aa23.1■■□□□ 1.29
MAP1LC3B-204ENST00000563720 BCORQ6W2J9 1755 aa23.1■■□□□ 1.29
MAP1LC3B-204ENST00000563720 TTLL6Q8N841 843 aa23.1■■□□□ 1.29
MAP1LC3B-204ENST00000563720 SERPINB2P05120 415 aa23.09■■□□□ 1.29
MAP1LC3B-204ENST00000563720 NEFMP07197 916 aa23.09■■□□□ 1.29
MAP1LC3B-204ENST00000563720 C2CD5Q86YS7 1000 aa23.08■■□□□ 1.29
MAP1LC3B-204ENST00000563720 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.28
MAP1LC3B-204ENST00000563720 PRELPP51888 382 aa23.07■■□□□ 1.28
MAP1LC3B-204ENST00000563720 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
MAP1LC3B-204ENST00000563720 DLEC1Q9Y238 1755 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 A0A087WZG4 1122 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 H0YIN7 160 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 A1BGP04217 495 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 HSPA1AP0DMV8 641 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 HSPA1BP0DMV9 641 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 IL6STP40189 918 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
MAP1LC3B-204ENST00000563720 MAPK8IP3Q9UPT6 1336 aa23.05■■□□□ 1.28
MAP1LC3B-204ENST00000563720 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
MAP1LC3B-204ENST00000563720 ANKRD31Q8N7Z5 1873 aa23.04■■□□□ 1.28
MAP1LC3B-204ENST00000563720 SNRPA1P09661 255 aaKnown RBP23.03■■□□□ 1.28
MAP1LC3B-204ENST00000563720 BICDL1Q6ZP65 573 aa23.03■■□□□ 1.28
MAP1LC3B-204ENST00000563720 MIS18AQ9NYP9 233 aa23.03■■□□□ 1.28
MAP1LC3B-204ENST00000563720 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms