RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 INTS4Q96HW7 963 aaKnown RBP14.2□□□□□ -0.14
ABCA3-203ENST00000563623 EYA1Q99502 592 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 KIF20BQ96Q89 1820 aa14.19□□□□□ -0.14
ABCA3-203ENST00000563623 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
ABCA3-203ENST00000563623 IL25Q9H293 177 aa14.19□□□□□ -0.14
ABCA3-203ENST00000563623 STX6O43752 255 aa14.19□□□□□ -0.14
ABCA3-203ENST00000563623 AK2P54819 239 aa14.19□□□□□ -0.14
ABCA3-203ENST00000563623 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
ABCA3-203ENST00000563623 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
ABCA3-203ENST00000563623 RGS12O14924 1447 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 CPSF1Q10570 1443 aaKnown RBP14.18□□□□□ -0.14
ABCA3-203ENST00000563623 GNAT3A8MTJ3 354 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 DYNC1I1O14576 645 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 ZSCAN22P10073 491 aaPredicted RBP14.18□□□□□ -0.14
ABCA3-203ENST00000563623 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
ABCA3-203ENST00000563623 SYT1P21579 422 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 PRPF40BQ6NWY9 871 aaKnown RBP14.17□□□□□ -0.14
ABCA3-203ENST00000563623 KNDC1Q76NI1 1749 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 LIMCH1Q9UPQ0 1083 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 ANKRD26Q9UPS8 1709 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 DNM1Q05193 864 aaKnown RBP14.17□□□□□ -0.14
ABCA3-203ENST00000563623 CHAF1AQ13111 956 aaPredicted RBP14.17□□□□□ -0.14
ABCA3-203ENST00000563623 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.14
ABCA3-203ENST00000563623 TAF7Q15545 349 aaPredicted RBP14.17□□□□□ -0.14
ABCA3-203ENST00000563623 NECAB1Q8N987 351 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 USP44Q9H0E7 712 aa14.17□□□□□ -0.14
ABCA3-203ENST00000563623 CAMK4Q16566 473 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 SNX14Q9Y5W7 946 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 TERF1P54274 439 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 FAM184AQ8NB25 1140 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 GJB2P29033 226 aa14.16□□□□□ -0.14
ABCA3-203ENST00000563623 IFIT2P09913 472 aaKnown RBP14.15□□□□□ -0.14
ABCA3-203ENST00000563623 TCEANC2Q96MN5 208 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 PDRG1Q9NUG6 133 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
ABCA3-203ENST00000563623 HSPA4P34932 840 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 NEO1Q92859 1461 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
ABCA3-203ENST00000563623 UBE2HP62256 183 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 CLASRPQ8N2M8 674 aaKnown RBP14.14□□□□□ -0.15
ABCA3-203ENST00000563623 RUFY2Q8WXA3 655 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 CDC42BPGQ6DT37 1551 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 SOS1Q07889 1333 aaPredicted RBP14.14□□□□□ -0.15
ABCA3-203ENST00000563623 REREQ9P2R6 1566 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 F13A1P00488 732 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 PI4KAP2A4QPH2 592 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 NBPF7P0C2Y1 421 aaPredicted RBP14.14□□□□□ -0.15
ABCA3-203ENST00000563623 STK3Q13188 491 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 PI4KAP1Q8N8J0 262 aa14.14□□□□□ -0.15
ABCA3-203ENST00000563623 VGLL3A8MV65 326 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 SGSM2O43147 1006 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
ABCA3-203ENST00000563623 CYP46A1Q9Y6A2 500 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
ABCA3-203ENST00000563623 LARGE1O95461 756 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 FOSBP53539 338 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 CBX1P83916 185 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 LARP1BQ659C4 914 aaKnown RBP14.13□□□□□ -0.15
ABCA3-203ENST00000563623 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
ABCA3-203ENST00000563623 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
ABCA3-203ENST00000563623 CCDC9Q9Y3X0 531 aaKnown RBP14.13□□□□□ -0.15
ABCA3-203ENST00000563623 TEFQ10587 303 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
ABCA3-203ENST00000563623 STAP2Q9UGK3 403 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 RAB11FIP3O75154 756 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 UVSSAQ2YD98 709 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 PA2G4Q9UQ80 394 aaKnown RBP14.12□□□□□ -0.15
ABCA3-203ENST00000563623 CRB1P82279 1406 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 A2ML1A8K2U0 1454 aa14.12□□□□□ -0.15
ABCA3-203ENST00000563623 ABTB2Q8N961 1025 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 RAD50Q92878 1312 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 PREX1Q8TCU6 1659 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 GOLGA6L6A8MZA4 724 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 HMGN5P82970 282 aaKnown RBP14.11□□□□□ -0.15
ABCA3-203ENST00000563623 AIMP1Q12904 312 aaKnown RBP14.11□□□□□ -0.15
ABCA3-203ENST00000563623 SIL1Q9H173 461 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 CHPF2Q9P2E5 772 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 KDM4AO75164 1064 aa14.11□□□□□ -0.15
ABCA3-203ENST00000563623 AACSQ86V21 672 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 PIBF1Q8WXW3 757 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 PRDM4Q9UKN5 801 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 CCDC192P0DO97 292 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 PTH1RQ03431 593 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 GLRX3O76003 335 aaKnown RBP14.1□□□□□ -0.15
ABCA3-203ENST00000563623 ADCK5Q3MIX3 580 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms