RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 ARHGAP27Q6ZUM4 889 aa23.21■■□□□ 1.31
TSC2-219ENST00000563346 COL15A1P39059 1388 aa23.21■■□□□ 1.31
TSC2-219ENST00000563346 UBR2Q8IWV8 1755 aa23.21■■□□□ 1.31
TSC2-219ENST00000563346 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
TSC2-219ENST00000563346 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
TSC2-219ENST00000563346 POLRMTO00411 1230 aaKnown RBP23.19■■□□□ 1.3
TSC2-219ENST00000563346 STARD3NLO95772 234 aa23.19■■□□□ 1.3
TSC2-219ENST00000563346 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
TSC2-219ENST00000563346 TM4SF1P30408 202 aa23.19■■□□□ 1.3
TSC2-219ENST00000563346 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
TSC2-219ENST00000563346 PIM2Q9P1W9 311 aa23.19■■□□□ 1.3
TSC2-219ENST00000563346 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
TSC2-219ENST00000563346 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
TSC2-219ENST00000563346 KCNA3P22001 575 aa23.17■■□□□ 1.3
TSC2-219ENST00000563346 ZNF790Q6PG37 636 aa23.17■■□□□ 1.3
TSC2-219ENST00000563346 DALRD3Q5D0E6 543 aaKnown RBP23.16■■□□□ 1.3
TSC2-219ENST00000563346 ZNF496Q96IT1 587 aaPredicted RBP23.16■■□□□ 1.3
TSC2-219ENST00000563346 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
TSC2-219ENST00000563346 SIPA1L3O60292 1781 aaPredicted RBP23.15■■□□□ 1.3
TSC2-219ENST00000563346 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
TSC2-219ENST00000563346 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
TSC2-219ENST00000563346 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
TSC2-219ENST00000563346 NFIXQ14938 502 aa23.15■■□□□ 1.3
TSC2-219ENST00000563346 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
TSC2-219ENST00000563346 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
TSC2-219ENST00000563346 ARFGEF1Q9Y6D6 1849 aa23.15■■□□□ 1.3
TSC2-219ENST00000563346 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.3
TSC2-219ENST00000563346 CHRNA5P30532 468 aa23.14■■□□□ 1.29
TSC2-219ENST00000563346 A0A087WZG4 1122 aa23.13■■□□□ 1.29
TSC2-219ENST00000563346 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
TSC2-219ENST00000563346 BTBD11A6QL63 1104 aa23.12■■□□□ 1.29
TSC2-219ENST00000563346 KIF3CO14782 793 aa23.12■■□□□ 1.29
TSC2-219ENST00000563346 BCL2L12Q9HB09 334 aa23.12■■□□□ 1.29
TSC2-219ENST00000563346 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
TSC2-219ENST00000563346 AFDNP55196 1824 aaKnown RBP23.11■■□□□ 1.29
TSC2-219ENST00000563346 SERPINB2P05120 415 aa23.11■■□□□ 1.29
TSC2-219ENST00000563346 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
TSC2-219ENST00000563346 NPM2Q86SE8 214 aaKnown RBP23.11■■□□□ 1.29
TSC2-219ENST00000563346 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
TSC2-219ENST00000563346 CEMIPQ8WUJ3 1361 aa23.11■■□□□ 1.29
TSC2-219ENST00000563346 BICDL1Q6ZP65 573 aa23.1■■□□□ 1.29
TSC2-219ENST00000563346 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.29
TSC2-219ENST00000563346 NRXN2Q9P2S2 1712 aa23.08■■□□□ 1.28
TSC2-219ENST00000563346 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
TSC2-219ENST00000563346 KCNQ3O43525 872 aa23.06■■□□□ 1.28
TSC2-219ENST00000563346 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
TSC2-219ENST00000563346 A1BGP04217 495 aa23.05■■□□□ 1.28
TSC2-219ENST00000563346 MCM10Q7L590 875 aa23.05■■□□□ 1.28
TSC2-219ENST00000563346 SCN7AQ01118 1682 aa23.04■■□□□ 1.28
TSC2-219ENST00000563346 NEFMP07197 916 aa23.04■■□□□ 1.28
TSC2-219ENST00000563346 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
TSC2-219ENST00000563346 C2CD5Q86YS7 1000 aa23.04■■□□□ 1.28
TSC2-219ENST00000563346 RNF181Q9P0P0 153 aa23.04■■□□□ 1.28
TSC2-219ENST00000563346 H0YIN7 160 aa23.03■■□□□ 1.28
TSC2-219ENST00000563346 DLEC1Q9Y238 1755 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
TSC2-219ENST00000563346 APLP1P51693 650 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 TTLL6Q8N841 843 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 NMRK2Q9NPI5 230 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
TSC2-219ENST00000563346 NPHP1O15259 732 aa23■■□□□ 1.27
TSC2-219ENST00000563346 TOMM70O94826 608 aa23■■□□□ 1.27
TSC2-219ENST00000563346 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
TSC2-219ENST00000563346 USP16Q9Y5T5 823 aa23■■□□□ 1.27
TSC2-219ENST00000563346 DZIP3Q86Y13 1208 aaKnown RBP22.99■■□□□ 1.27
TSC2-219ENST00000563346 SETDB2Q96T68 719 aa22.99■■□□□ 1.27
TSC2-219ENST00000563346 KDM2BQ8NHM5 1336 aa22.99■■□□□ 1.27
TSC2-219ENST00000563346 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
TSC2-219ENST00000563346 PDE6BP35913 854 aa22.98■■□□□ 1.27
TSC2-219ENST00000563346 HTRA3P83110 453 aa22.98■■□□□ 1.27
TSC2-219ENST00000563346 PDZRN3Q9UPQ7 1066 aa22.98■■□□□ 1.27
TSC2-219ENST00000563346 SBF1O95248 1867 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 PRAMEF22A3QJZ6 481 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
TSC2-219ENST00000563346 RASSF7Q02833 373 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 PRR5LQ6MZQ0 368 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
TSC2-219ENST00000563346 CCDC24Q8N4L8 307 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 ZNF622Q969S3 477 aaKnown RBP eCLIP22.97■■□□□ 1.27
TSC2-219ENST00000563346 BRIP1Q9BX63 1249 aa22.97■■□□□ 1.27
TSC2-219ENST00000563346 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
TSC2-219ENST00000563346 CNBD1Q8NA66 436 aa22.96■■□□□ 1.27
TSC2-219ENST00000563346 BCORQ6W2J9 1755 aa22.96■■□□□ 1.27
TSC2-219ENST00000563346 DNAJC5GQ8N7S2 189 aa22.95■■□□□ 1.26
TSC2-219ENST00000563346 ANKRD31Q8N7Z5 1873 aa22.95■■□□□ 1.26
TSC2-219ENST00000563346 LMNB1P20700 586 aa22.94■■□□□ 1.26
TSC2-219ENST00000563346 ST5P78524 1137 aa22.94■■□□□ 1.26
TSC2-219ENST00000563346 ZNF652Q9Y2D9 606 aa22.94■■□□□ 1.26
TSC2-219ENST00000563346 ZC3H4Q9UPT8 1303 aaKnown RBP22.92■■□□□ 1.26
TSC2-219ENST00000563346 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
TSC2-219ENST00000563346 MIS18AQ9NYP9 233 aa22.92■■□□□ 1.26
TSC2-219ENST00000563346 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
TSC2-219ENST00000563346 WDR90Q96KV7 1748 aa22.91■■□□□ 1.26
TSC2-219ENST00000563346 MAPK8IP3Q9UPT6 1336 aa22.91■■□□□ 1.26
TSC2-219ENST00000563346 CLEC4GQ6UXB4 293 aa22.91■■□□□ 1.26
TSC2-219ENST00000563346 PNISRQ8TF01 805 aaKnown RBP22.91■■□□□ 1.26
TSC2-219ENST00000563346 RRAGCQ9HB90 399 aa22.91■■□□□ 1.26
TSC2-219ENST00000563346 ZNF219Q9P2Y4 722 aaPredicted RBP22.91■■□□□ 1.26
TSC2-219ENST00000563346 TNRC6CQ9HCJ0 1690 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms