RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
SNX29-202ENST00000563308 ATP6V1AP38606 617 aa13.96□□□□□ -0.17
SNX29-202ENST00000563308 SIK1P57059 783 aa13.96□□□□□ -0.17
SNX29-202ENST00000563308 NCAPD2Q15021 1401 aa13.96□□□□□ -0.18
SNX29-202ENST00000563308 CASP8AP2Q9UKL3 1982 aa13.95□□□□□ -0.18
SNX29-202ENST00000563308 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
SNX29-202ENST00000563308 SLC17A8Q8NDX2 589 aa13.95□□□□□ -0.18
SNX29-202ENST00000563308 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
SNX29-202ENST00000563308 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
SNX29-202ENST00000563308 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
SNX29-202ENST00000563308 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
SNX29-202ENST00000563308 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
SNX29-202ENST00000563308 ADRA2BP18089 450 aa13.94□□□□□ -0.18
SNX29-202ENST00000563308 MAP2K2P36507 400 aa13.94□□□□□ -0.18
SNX29-202ENST00000563308 POLR3GLQ9BT43 218 aa13.94□□□□□ -0.18
SNX29-202ENST00000563308 CYP27B1O15528 508 aa13.93□□□□□ -0.18
SNX29-202ENST00000563308 DDNO94850 711 aaPredicted RBP13.93□□□□□ -0.18
SNX29-202ENST00000563308 GYS1P13807 737 aa13.93□□□□□ -0.18
SNX29-202ENST00000563308 PANK3Q9H999 370 aa13.93□□□□□ -0.18
SNX29-202ENST00000563308 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
SNX29-202ENST00000563308 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
SNX29-202ENST00000563308 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
SNX29-202ENST00000563308 CYP4F22Q6NT55 531 aa13.92□□□□□ -0.18
SNX29-202ENST00000563308 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
SNX29-202ENST00000563308 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
SNX29-202ENST00000563308 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
SNX29-202ENST00000563308 EYA1Q99502 592 aa13.91□□□□□ -0.18
SNX29-202ENST00000563308 TAF1DQ9H5J8 278 aaPredicted RBP13.91□□□□□ -0.18
SNX29-202ENST00000563308 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
SNX29-202ENST00000563308 TNNT2P45379 298 aaPredicted RBP13.89□□□□□ -0.19
SNX29-202ENST00000563308 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
SNX29-202ENST00000563308 MAP2P11137 1827 aaKnown RBP13.88□□□□□ -0.19
SNX29-202ENST00000563308 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
SNX29-202ENST00000563308 SCN4AP35499 1836 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 THSD7BQ9C0I4 1608 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 NFKBIEO00221 500 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 ITPK1Q13572 414 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 MAP1SQ66K74 1059 aaPredicted RBP13.87□□□□□ -0.19
SNX29-202ENST00000563308 PIGBQ92521 554 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
SNX29-202ENST00000563308 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNX29-202ENST00000563308 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
SNX29-202ENST00000563308 DDX21Q9NR30 783 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNX29-202ENST00000563308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNX29-202ENST00000563308 TMOD3Q9NYL9 352 aa13.86□□□□□ -0.19
SNX29-202ENST00000563308 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
SNX29-202ENST00000563308 AOC2O75106 756 aa13.85□□□□□ -0.19
SNX29-202ENST00000563308 EPHX2P34913 555 aa13.85□□□□□ -0.19
SNX29-202ENST00000563308 KIF7Q2M1P5 1343 aa13.85□□□□□ -0.19
SNX29-202ENST00000563308 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
SNX29-202ENST00000563308 H0YIN7 160 aa13.84□□□□□ -0.19
SNX29-202ENST00000563308 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
SNX29-202ENST00000563308 SPG7Q9UQ90 795 aa13.84□□□□□ -0.19
SNX29-202ENST00000563308 ITGB4P16144 1822 aa13.84□□□□□ -0.19
SNX29-202ENST00000563308 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
SNX29-202ENST00000563308 PHKG2P15735 406 aa13.83□□□□□ -0.2
SNX29-202ENST00000563308 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
SNX29-202ENST00000563308 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
SNX29-202ENST00000563308 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.2
SNX29-202ENST00000563308 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
SNX29-202ENST00000563308 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
SNX29-202ENST00000563308 DDR1Q08345 913 aa13.81□□□□□ -0.2
SNX29-202ENST00000563308 FKBP8Q14318 412 aa13.81□□□□□ -0.2
SNX29-202ENST00000563308 IFNL2Q8IZJ0 200 aa13.81□□□□□ -0.2
SNX29-202ENST00000563308 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
SNX29-202ENST00000563308 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
SNX29-202ENST00000563308 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
SNX29-202ENST00000563308 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
SNX29-202ENST00000563308 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
SNX29-202ENST00000563308 AEBP1Q8IUX7 1158 aa13.8□□□□□ -0.2
SNX29-202ENST00000563308 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.28e-7■■□□□ 12.1
SNX29-202ENST00000563308 TLL2Q9Y6L7 1015 aa13.8□□□□□ -0.2
SNX29-202ENST00000563308 PITPNM2Q9BZ72 1349 aa13.8□□□□□ -0.2
SNX29-202ENST00000563308 POLRMTO00411 1230 aaKnown RBP13.79□□□□□ -0.2
SNX29-202ENST00000563308 C21orf2O43822 256 aa13.79□□□□□ -0.2
SNX29-202ENST00000563308 ZPR1O75312 459 aa13.78□□□□□ -0.2
SNX29-202ENST00000563308 IL13P35225 146 aa13.78□□□□□ -0.2
SNX29-202ENST00000563308 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
SNX29-202ENST00000563308 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
SNX29-202ENST00000563308 CNTNAP4Q9C0A0 1308 aa13.78□□□□□ -0.2
SNX29-202ENST00000563308 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
SNX29-202ENST00000563308 LTBP3Q9NS15 1303 aa13.77□□□□□ -0.21
SNX29-202ENST00000563308 ATG3Q9NT62 314 aa13.77□□□□□ -0.21
SNX29-202ENST00000563308 SRP68Q9UHB9 627 aaKnown RBP13.77□□□□□ -0.21
SNX29-202ENST00000563308 KDRP35968 1356 aa13.76□□□□□ -0.21
SNX29-202ENST00000563308 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
SNX29-202ENST00000563308 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
SNX29-202ENST00000563308 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
SNX29-202ENST00000563308 SLC4A9Q96Q91 983 aa13.76□□□□□ -0.21
SNX29-202ENST00000563308 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
SNX29-202ENST00000563308 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
SNX29-202ENST00000563308 NOGQ13253 232 aa13.75□□□□□ -0.21
SNX29-202ENST00000563308 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
SNX29-202ENST00000563308 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
SNX29-202ENST00000563308 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
SNX29-202ENST00000563308 DLEC1Q9Y238 1755 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 TM4SF1P30408 202 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 MTHFSP49914 203 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 PKN2Q16513 984 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms