RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
PKM-208ENST00000563275 TGFB2P61812 414 aa16.74■□□□□ 0.27
PKM-208ENST00000563275 MCM10Q7L590 875 aa16.74■□□□□ 0.27
PKM-208ENST00000563275 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
PKM-208ENST00000563275 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
PKM-208ENST00000563275 STARD3NLO95772 234 aa16.73■□□□□ 0.27
PKM-208ENST00000563275 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
PKM-208ENST00000563275 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
PKM-208ENST00000563275 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
PKM-208ENST00000563275 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
PKM-208ENST00000563275 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
PKM-208ENST00000563275 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
PKM-208ENST00000563275 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
PKM-208ENST00000563275 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
PKM-208ENST00000563275 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
PKM-208ENST00000563275 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
PKM-208ENST00000563275 ADCY9O60503 1353 aa16.7■□□□□ 0.26
PKM-208ENST00000563275 ZPR1O75312 459 aa16.7■□□□□ 0.26
PKM-208ENST00000563275 KCNA3P22001 575 aa16.7■□□□□ 0.26
PKM-208ENST00000563275 NFIXQ14938 502 aa16.7■□□□□ 0.26
PKM-208ENST00000563275 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
PKM-208ENST00000563275 CANXP27824 592 aaKnown RBP16.69■□□□□ 0.26
PKM-208ENST00000563275 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
PKM-208ENST00000563275 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
PKM-208ENST00000563275 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
PKM-208ENST00000563275 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
PKM-208ENST00000563275 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
PKM-208ENST00000563275 DPEP1P16444 411 aa16.68■□□□□ 0.26
PKM-208ENST00000563275 SCN7AQ01118 1682 aa16.68■□□□□ 0.26
PKM-208ENST00000563275 N4BP2Q86UW6 1770 aaPredicted RBP16.67■□□□□ 0.26
PKM-208ENST00000563275 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
PKM-208ENST00000563275 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
PKM-208ENST00000563275 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
PKM-208ENST00000563275 A0A087WZG4 1122 aa16.66■□□□□ 0.26
PKM-208ENST00000563275 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
PKM-208ENST00000563275 A1BGP04217 495 aa16.66■□□□□ 0.26
PKM-208ENST00000563275 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
PKM-208ENST00000563275 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
PKM-208ENST00000563275 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
PKM-208ENST00000563275 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
PKM-208ENST00000563275 NEFMP07197 916 aa16.64■□□□□ 0.25
PKM-208ENST00000563275 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
PKM-208ENST00000563275 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
PKM-208ENST00000563275 PNISRQ8TF01 805 aaKnown RBP16.63■□□□□ 0.25
PKM-208ENST00000563275 THUMPD2Q9BTF0 503 aaKnown RBP16.63■□□□□ 0.25
PKM-208ENST00000563275 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 SERPINB2P05120 415 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
PKM-208ENST00000563275 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
PKM-208ENST00000563275 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
PKM-208ENST00000563275 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 RGL2O15211 777 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 CARMIL3Q8ND23 1372 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
PKM-208ENST00000563275 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
PKM-208ENST00000563275 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
PKM-208ENST00000563275 CHRNA5P30532 468 aa16.6■□□□□ 0.25
PKM-208ENST00000563275 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
PKM-208ENST00000563275 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
PKM-208ENST00000563275 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
PKM-208ENST00000563275 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
PKM-208ENST00000563275 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
PKM-208ENST00000563275 CLEC4GQ6UXB4 293 aa16.58■□□□□ 0.24
PKM-208ENST00000563275 ZNF330Q9Y3S2 320 aaPredicted RBP16.58■□□□□ 0.24
PKM-208ENST00000563275 DLEC1Q9Y238 1755 aa16.58■□□□□ 0.24
PKM-208ENST00000563275 RIPK4P57078 832 aa16.57■□□□□ 0.24
PKM-208ENST00000563275 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
PKM-208ENST00000563275 BABAM1Q9NWV8 329 aa16.57■□□□□ 0.24
PKM-208ENST00000563275 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
PKM-208ENST00000563275 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
PKM-208ENST00000563275 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
PKM-208ENST00000563275 BRIP1Q9BX63 1249 aa16.56■□□□□ 0.24
PKM-208ENST00000563275 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
PKM-208ENST00000563275 LMOD3Q0VAK6 560 aa16.55■□□□□ 0.24
PKM-208ENST00000563275 RUNDC1Q96C34 613 aa16.55■□□□□ 0.24
PKM-208ENST00000563275 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
PKM-208ENST00000563275 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
PKM-208ENST00000563275 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
PKM-208ENST00000563275 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
PKM-208ENST00000563275 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
PKM-208ENST00000563275 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
PKM-208ENST00000563275 LRP10Q7Z4F1 713 aa16.53■□□□□ 0.24
PKM-208ENST00000563275 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
PKM-208ENST00000563275 C2CD5Q86YS7 1000 aa16.53■□□□□ 0.24
PKM-208ENST00000563275 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
PKM-208ENST00000563275 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.241e-9■□□□□ 8.7
PKM-208ENST00000563275 CNBD1Q8NA66 436 aa16.52■□□□□ 0.24
PKM-208ENST00000563275 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
PKM-208ENST00000563275 ZNF652Q9Y2D9 606 aa16.52■□□□□ 0.24
PKM-208ENST00000563275 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
PKM-208ENST00000563275 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.24
PKM-208ENST00000563275 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
PKM-208ENST00000563275 H0YIN7 160 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms