RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SLC39A6Q13433 755 aa19.02■□□□□ 0.64
CDH11-207ENST00000563255 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
CDH11-207ENST00000563255 TSPYL6Q8N831 410 aa19.02■□□□□ 0.64
CDH11-207ENST00000563255 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
CDH11-207ENST00000563255 CICQ96RK0 1608 aaPredicted RBP19.02■□□□□ 0.64
CDH11-207ENST00000563255 LY75O60449 1722 aa19.01■□□□□ 0.63
CDH11-207ENST00000563255 HOXB7P09629 217 aa19.01■□□□□ 0.63
CDH11-207ENST00000563255 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
CDH11-207ENST00000563255 TFCP2L1Q9NZI6 479 aa19.01■□□□□ 0.63
CDH11-207ENST00000563255 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
CDH11-207ENST00000563255 SLC16A10Q8TF71 515 aa19■□□□□ 0.63
CDH11-207ENST00000563255 FMNL2Q96PY5 1086 aa19■□□□□ 0.63
CDH11-207ENST00000563255 ATG3Q9NT62 314 aa19■□□□□ 0.63
CDH11-207ENST00000563255 KRT24Q2M2I5 525 aa18.99■□□□□ 0.63
CDH11-207ENST00000563255 CHMP4AQ9BY43 222 aa18.99■□□□□ 0.63
CDH11-207ENST00000563255 ELL2O00472 640 aaPredicted RBP18.98■□□□□ 0.63
CDH11-207ENST00000563255 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
CDH11-207ENST00000563255 POLD1P28340 1107 aa18.98■□□□□ 0.63
CDH11-207ENST00000563255 ALDH1L2Q3SY69 923 aa18.98■□□□□ 0.63
CDH11-207ENST00000563255 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
CDH11-207ENST00000563255 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
CDH11-207ENST00000563255 PNPLA7Q6ZV29 1317 aa18.98■□□□□ 0.63
CDH11-207ENST00000563255 TJP1Q07157 1748 aa18.97■□□□□ 0.63
CDH11-207ENST00000563255 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
CDH11-207ENST00000563255 RARSP54136 660 aaKnown RBP18.97■□□□□ 0.63
CDH11-207ENST00000563255 C1QTNF8P60827 252 aa18.97■□□□□ 0.63
CDH11-207ENST00000563255 GPR162Q16538 588 aa18.97■□□□□ 0.63
CDH11-207ENST00000563255 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
CDH11-207ENST00000563255 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
CDH11-207ENST00000563255 CCNL1Q9UK58 526 aaPredicted RBP18.96■□□□□ 0.63
CDH11-207ENST00000563255 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
CDH11-207ENST00000563255 COL5A3P25940 1745 aaPredicted RBP18.95■□□□□ 0.62
CDH11-207ENST00000563255 MSH5O43196 834 aa18.95■□□□□ 0.62
CDH11-207ENST00000563255 SNRPA1P09661 255 aaKnown RBP18.95■□□□□ 0.62
CDH11-207ENST00000563255 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
CDH11-207ENST00000563255 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
CDH11-207ENST00000563255 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
CDH11-207ENST00000563255 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
CDH11-207ENST00000563255 PTCD1O75127 700 aaKnown RBP18.92■□□□□ 0.62
CDH11-207ENST00000563255 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
CDH11-207ENST00000563255 TEX13AQ9BXU3 409 aaPredicted RBP18.92■□□□□ 0.62
CDH11-207ENST00000563255 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
CDH11-207ENST00000563255 PALLDQ8WX93 1383 aa18.92■□□□□ 0.62
CDH11-207ENST00000563255 BCAR3O75815 825 aa18.91■□□□□ 0.62
CDH11-207ENST00000563255 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
CDH11-207ENST00000563255 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
CDH11-207ENST00000563255 MRPL50Q8N5N7 158 aaKnown RBP18.9■□□□□ 0.62
CDH11-207ENST00000563255 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
CDH11-207ENST00000563255 SMC4Q9NTJ3 1288 aa18.9■□□□□ 0.62
CDH11-207ENST00000563255 USP16Q9Y5T5 823 aa18.9■□□□□ 0.62
CDH11-207ENST00000563255 EIF2S2P20042 333 aaKnown RBP18.89■□□□□ 0.61
CDH11-207ENST00000563255 COL23A1Q86Y22 540 aaPredicted RBP18.89■□□□□ 0.61
CDH11-207ENST00000563255 NLGN2Q8NFZ4 835 aa18.89■□□□□ 0.61
CDH11-207ENST00000563255 STK31Q9BXU1 1019 aa18.89■□□□□ 0.61
CDH11-207ENST00000563255 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
CDH11-207ENST00000563255 SIK1P57059 783 aa18.88■□□□□ 0.61
CDH11-207ENST00000563255 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.88■□□□□ 0.61
CDH11-207ENST00000563255 SLC4A9Q96Q91 983 aa18.88■□□□□ 0.61
CDH11-207ENST00000563255 ERBB4Q15303 1308 aa18.88■□□□□ 0.61
CDH11-207ENST00000563255 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
CDH11-207ENST00000563255 KIF16BQ96L93 1317 aa18.87■□□□□ 0.61
CDH11-207ENST00000563255 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
CDH11-207ENST00000563255 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
CDH11-207ENST00000563255 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
CDH11-207ENST00000563255 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
CDH11-207ENST00000563255 RRP1P56182 461 aaKnown RBP18.86■□□□□ 0.61
CDH11-207ENST00000563255 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
CDH11-207ENST00000563255 N4BP2Q86UW6 1770 aaPredicted RBP18.86■□□□□ 0.61
CDH11-207ENST00000563255 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
CDH11-207ENST00000563255 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
CDH11-207ENST00000563255 DNAJC10Q8IXB1 793 aa18.85■□□□□ 0.61
CDH11-207ENST00000563255 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
CDH11-207ENST00000563255 NECTIN2Q92692 538 aa18.85■□□□□ 0.61
CDH11-207ENST00000563255 DDX21Q9NR30 783 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDH11-207ENST00000563255 CEP350Q5VT06 3117 aa18.85■□□□□ 0.61
CDH11-207ENST00000563255 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CDH11-207ENST00000563255 STARD3NLO95772 234 aa18.84■□□□□ 0.61
CDH11-207ENST00000563255 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
CDH11-207ENST00000563255 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.6
CDH11-207ENST00000563255 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
CDH11-207ENST00000563255 PDIA6Q15084 440 aa18.83■□□□□ 0.6
CDH11-207ENST00000563255 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.6
CDH11-207ENST00000563255 HYPKQ9NX55 129 aa18.83■□□□□ 0.6
CDH11-207ENST00000563255 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
CDH11-207ENST00000563255 PTPRCP08575 1304 aa18.82■□□□□ 0.6
CDH11-207ENST00000563255 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
CDH11-207ENST00000563255 C4BP0C0L5 1744 aa18.81■□□□□ 0.6
CDH11-207ENST00000563255 ITPK1Q13572 414 aa18.81■□□□□ 0.6
CDH11-207ENST00000563255 FLAD1Q8NFF5 587 aa18.81■□□□□ 0.6
CDH11-207ENST00000563255 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
CDH11-207ENST00000563255 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 PLIN1O60240 522 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 GRIN3BO60391 1043 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 A1BGP04217 495 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 MS4A1P11836 297 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
CDH11-207ENST00000563255 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
CDH11-207ENST00000563255 ATF7IPQ6VMQ6 1270 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 G2E3Q7L622 706 aa18.8■□□□□ 0.6
CDH11-207ENST00000563255 FLIIQ13045 1269 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms