RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HDAC9Q9UKV0 1011 aa5.9□□□□□ -1.46
SMG1-207ENST00000563235 IFT140Q96RY7 1462 aa5.9□□□□□ -1.46
SMG1-207ENST00000563235 GRXCR2A6NFK2 248 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 TBX3O15119 743 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 NPHP1O15259 732 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 XRCC5P13010 732 aaKnown RBP5.9□□□□□ -1.47
SMG1-207ENST00000563235 DIEXFQ68CQ4 756 aaKnown RBP5.9□□□□□ -1.47
SMG1-207ENST00000563235 MCF2L2Q86YR7 1114 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 RASEFQ8IZ41 740 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 FAM126AQ9BYI3 521 aaPredicted RBP5.9□□□□□ -1.47
SMG1-207ENST00000563235 AKAP2Q9Y2D5 859 aa5.9□□□□□ -1.47
SMG1-207ENST00000563235 RBP3P10745 1247 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 NAT2P11245 290 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 ZBED6P86452 979 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 CCDC92Q53HC0 331 aaPredicted RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 LARP1BQ659C4 914 aaKnown RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 GJD4Q96KN9 370 aaPredicted RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 TMEM51Q9NW97 253 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 GEMIN8Q9NWZ8 242 aaKnown RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 MAPK1P28482 360 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 FLT3P36888 993 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 GPSM2P81274 684 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 FAM69CQ0P6D2 419 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 ZNF211Q13398 564 aaPredicted RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 KIF12Q96FN5 646 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 CEP89Q96ST8 783 aa5.89□□□□□ -1.47
SMG1-207ENST00000563235 NOVA2Q9UNW9 492 aaKnown RBP5.89□□□□□ -1.47
SMG1-207ENST00000563235 INO80DQ53TQ3 878 aaPredicted RBP5.88□□□□□ -1.47
SMG1-207ENST00000563235 PPP2R2DQ66LE6 453 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 ERP27Q96DN0 273 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 CENPOQ9BU64 300 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 GPCPD1Q9NPB8 672 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 K7ELQ4 463 aaPredicted RBP5.88□□□□□ -1.47
SMG1-207ENST00000563235 CDC27P30260 824 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 TIE1P35590 1138 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 FAM160A1Q05DH4 1040 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 PSMD2Q13200 908 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 RAPGEF1Q13905 1077 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 PDXDC1Q6P996 788 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 ANKRD13DQ6ZTN6 518 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 TAS1R3Q7RTX0 852 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 SLC26A4O43511 780 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 NAT1P18440 290 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 BRD3Q15059 726 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 NFE2L2Q16236 605 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 TBC1D10BQ4KMP7 808 aaPredicted RBP5.88□□□□□ -1.47
SMG1-207ENST00000563235 KIAA1958Q8N8K9 716 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 ASB16Q96NS5 453 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 CLIC5Q9NZA1 410 aa5.88□□□□□ -1.47
SMG1-207ENST00000563235 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 CDKN1CP49918 316 aaPredicted RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 EAPPQ56P03 285 aaPredicted RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 PPP4R4Q6NUP7 873 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 SAMD3Q8N6K7 520 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 CCDC89Q8N998 374 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 MRPS23Q9Y3D9 190 aaKnown RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 H3BRB1 525 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 P4HBP07237 508 aaKnown RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 VPS72Q15906 364 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 Q3C1V9 767 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 KRT77Q7Z794 578 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 TUT1Q9H6E5 874 aaKnown RBP5.87□□□□□ -1.47
SMG1-207ENST00000563235 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 ANAPC4Q9UJX5 808 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 PHF8Q9UPP1 1060 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
SMG1-207ENST00000563235 MTA2O94776 668 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 CLCN1P35523 988 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 TRAPPC10P48553 1259 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 MAP2K1Q02750 393 aaPredicted RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 TMEM95Q3KNT9 176 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 ILDR2Q71H61 639 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 JAMLQ86YT9 394 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 MYRIPQ8NFW9 859 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 SPATA31D1Q6ZQQ2 1576 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 SYNRGQ9UMZ2 1314 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 CLK1P49759 484 aaKnown RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 ARID5AQ03989 594 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 ELOAQ14241 798 aaKnown RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 CDC37Q16543 378 aaPredicted RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 ECM1Q16610 540 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 CCDC70Q6NSX1 233 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 C14orf80Q86SX3 495 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 CHCHD4Q8N4Q1 142 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 VPS37AQ8NEZ2 397 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 FRMD6Q96NE9 622 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 TSPYL2Q9H2G4 693 aaPredicted RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 TYW1Q9NV66 732 aaKnown RBP5.86□□□□□ -1.47
SMG1-207ENST00000563235 ASAP1Q9ULH1 1129 aa5.86□□□□□ -1.47
SMG1-207ENST00000563235 POTEMA6NI47 508 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 A6NJY4 79 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 EIF4G3O43432 1585 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 PLIN1O60240 522 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 ABL1P00519 1130 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 QPCTQ16769 361 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 SLC4A8Q2Y0W8 1093 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms