RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CTBSQ01459 385 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 NCOA4Q13772 614 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 FIGNL1Q6PIW4 674 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 NLRP8Q86W28 1048 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 ADAMTS19Q8TE59 1207 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 ABHD17AQ96GS6 310 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 ZCCHC2Q9C0B9 1178 aaKnown RBP6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 PCDHGC4Q9Y5F7 938 aa6.42□□□□□ -1.38
SHCBP1-202ENST00000563219 ARID3CA6NKF2 412 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 FGFR3P22607 806 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 NBPF1Q3BBV0 1214 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 PODNQ7Z5L7 613 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 GALNT6Q8NCL4 622 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 GLMNQ92990 594 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 ZDHHC3Q9NYG2 299 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 USP3Q9Y6I4 520 aa6.41□□□□□ -1.38
SHCBP1-202ENST00000563219 A0A1W2PNR3 127 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 USP17L5A8MUK1 530 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 BMP4P12644 408 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 FOXK2Q01167 660 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 HDGFL1Q5TGJ6 251 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 DEPDC4Q8N2C3 294 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 GOLGA6L1Q8N7Z2 621 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 EDARADDQ8WWZ3 215 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 ZNF358Q9NW07 568 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 CABP1Q9NZU7 370 aa6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 SCHIP1Q9P0W5 487 aaPredicted RBP6.4□□□□□ -1.38
SHCBP1-202ENST00000563219 SHISA8B8ZZ34 492 aa6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 ATXN7O15265 892 aaPredicted RBP6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 IGHA1P01876 353 aa6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 TATP17735 454 aaPredicted RBP6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 PSME1Q06323 249 aa6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 GPAT2Q6NUI2 795 aa6.39□□□□□ -1.39
SHCBP1-202ENST00000563219 ZBTB7BO15156 539 aaPredicted RBP6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 SNRPNP63162 240 aaKnown RBP6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 TNP2Q05952 138 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 TRIM50Q86XT4 487 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 PLEKHM2Q8IWE5 1019 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 CALR3Q96L12 384 aaKnown RBP6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 ZIC5Q96T25 663 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 GGA1Q9UJY5 639 aa6.38□□□□□ -1.39
SHCBP1-202ENST00000563219 ARAFP10398 606 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 EPHA4P54764 986 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 TEAD4Q15561 434 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 SLCO4C1Q6ZQN7 724 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 HCN2Q9UL51 889 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 PARP3Q9Y6F1 533 aa6.37□□□□□ -1.39
SHCBP1-202ENST00000563219 ATP9BO43861 1147 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 NOS2P35228 1153 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 ATP1A2P50993 1020 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 SUZ12Q15022 739 aaKnown RBP6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 TNS4Q8IZW8 715 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 CCDC82Q8N4S0 544 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 L3MBTL2Q969R5 705 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 UCN2Q96RP3 112 aa6.36□□□□□ -1.39
SHCBP1-202ENST00000563219 DCDC2BA2VCK2 349 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 USP17L3A6NCW0 530 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 USP17L4A6NCW7 530 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 KHNYNO15037 678 aaKnown RBP6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 FAM157BP0CG42 384 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 EPXP11678 715 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 TXLNAP40222 546 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 CLDN10P78369 228 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 PLA2G4EQ3MJ16 856 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 CCDC102BQ68D86 513 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 USP17L2Q6R6M4 530 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 BICDL1Q6ZP65 573 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 USP17L1Q7RTZ2 530 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 C7orf43Q8WVR3 580 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 BTBD6Q96KE9 485 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 RRAGCQ9HB90 399 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 MKL2Q9ULH7 1088 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 GJA3Q9Y6H8 435 aa6.35□□□□□ -1.39
SHCBP1-202ENST00000563219 NEURL1BA8MQ27 555 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 EML1O00423 815 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 HOXB4P17483 251 aaPredicted RBP6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 CD33P20138 364 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 LINC00114Q6XXX2 140 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 SLC9A9Q8IVB4 645 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 LARGE2Q8N3Y3 721 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 TPCN2Q8NHX9 752 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 CCDC97Q96F63 343 aaPredicted RBP6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 KLF15Q9UIH9 416 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
SHCBP1-202ENST00000563219 SERTM1A2A2V5 107 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 PALM3A6NDB9 673 aaPredicted RBP6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 EFSO43281 561 aa6.33□□□□□ -1.4
SHCBP1-202ENST00000563219 ITGB2P05107 769 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms