RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FGFR3P22607 806 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 KANK3Q6NY19 840 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 NLRP8Q86W28 1048 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
SMG1-206ENST00000562668 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMG1-206ENST00000562668 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
SMG1-206ENST00000562668 SCHIP1Q9P0W5 487 aaPredicted RBP9.23□□□□□ -0.93
SMG1-206ENST00000562668 OIP5O43482 229 aa9.22□□□□□ -0.93
SMG1-206ENST00000562668 BNIP3LO60238 219 aa9.22□□□□□ -0.93
SMG1-206ENST00000562668 TATP17735 454 aaPredicted RBP9.22□□□□□ -0.93
SMG1-206ENST00000562668 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
SMG1-206ENST00000562668 CLUAP1Q96AJ1 413 aa9.22□□□□□ -0.93
SMG1-206ENST00000562668 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
SMG1-206ENST00000562668 BMP4P12644 408 aa9.21□□□□□ -0.94
SMG1-206ENST00000562668 EPHA4P54764 986 aa9.21□□□□□ -0.94
SMG1-206ENST00000562668 GDF2Q9UK05 429 aaPredicted RBP9.21□□□□□ -0.94
SMG1-206ENST00000562668 PCDHGC4Q9Y5F7 938 aa9.21□□□□□ -0.94
SMG1-206ENST00000562668 A0A1W2PNR3 127 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 ATP1A2P50993 1020 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 FOXK2Q01167 660 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
SMG1-206ENST00000562668 PODNQ7Z5L7 613 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 TPCN2Q8NHX9 752 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 ZCCHC2Q9C0B9 1178 aaKnown RBP9.2□□□□□ -0.94
SMG1-206ENST00000562668 KIAA1024Q9UPX6 916 aa9.2□□□□□ -0.94
SMG1-206ENST00000562668 DNMT3AQ9Y6K1 912 aaPredicted RBP9.2□□□□□ -0.94
SMG1-206ENST00000562668 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
SMG1-206ENST00000562668 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
SMG1-206ENST00000562668 FNBP4Q8N3X1 1017 aaPredicted RBP9.19□□□□□ -0.94
SMG1-206ENST00000562668 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
SMG1-206ENST00000562668 ZDHHC1Q8WTX9 485 aa9.19□□□□□ -0.94
SMG1-206ENST00000562668 GLMNQ92990 594 aa9.19□□□□□ -0.94
SMG1-206ENST00000562668 C2CD2LO14523 706 aa9.18□□□□□ -0.94
SMG1-206ENST00000562668 CLDN10P78369 228 aa9.18□□□□□ -0.94
SMG1-206ENST00000562668 SLCO4C1Q6ZQN7 724 aa9.18□□□□□ -0.94
SMG1-206ENST00000562668 SLC9A9Q8IVB4 645 aa9.18□□□□□ -0.94
SMG1-206ENST00000562668 PARP3Q9Y6F1 533 aa9.18□□□□□ -0.94
SMG1-206ENST00000562668 CNTNAP5Q8WYK1 1306 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 DCDC2BA2VCK2 349 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 SHISA8B8ZZ34 492 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 TXLNAP40222 546 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 CTBSQ01459 385 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 TEAD4Q15561 434 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 CCDC102BQ68D86 513 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
SMG1-206ENST00000562668 ZBTB7BO15156 539 aaPredicted RBP9.16□□□□□ -0.94
SMG1-206ENST00000562668 FAM157BP0CG42 384 aa9.16□□□□□ -0.94
SMG1-206ENST00000562668 BICDL1Q6ZP65 573 aa9.16□□□□□ -0.94
SMG1-206ENST00000562668 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
SMG1-206ENST00000562668 OGFOD1Q8N543 542 aa9.16□□□□□ -0.94
SMG1-206ENST00000562668 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
SMG1-206ENST00000562668 GJA3Q9Y6H8 435 aa9.16□□□□□ -0.94
SMG1-206ENST00000562668 ARAFP10398 606 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 MAPTP10636 758 aaKnown RBP9.15□□□□□ -0.94
SMG1-206ENST00000562668 TNP2Q05952 138 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 TBCELQ5QJ74 424 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 SAMD5Q5TGI4 173 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 SIX5Q8N196 739 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 BEND7Q8N7W2 519 aaPredicted RBP9.15□□□□□ -0.94
SMG1-206ENST00000562668 L3MBTL2Q969R5 705 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 MKRN1Q9UHC7 482 aaKnown RBP9.15□□□□□ -0.94
SMG1-206ENST00000562668 GGA1Q9UJY5 639 aa9.15□□□□□ -0.94
SMG1-206ENST00000562668 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
SMG1-206ENST00000562668 M0R2N6 131 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 KHNYNO15037 678 aaKnown RBP9.14□□□□□ -0.95
SMG1-206ENST00000562668 CD33P20138 364 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 NOS2P35228 1153 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 FAM182BQ5T319 152 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 EDARADDQ8WWZ3 215 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
SMG1-206ENST00000562668 ZNF232Q9UNY5 417 aa9.14□□□□□ -0.95
SMG1-206ENST00000562668 MAFBQ9Y5Q3 323 aaPredicted RBP9.14□□□□□ -0.95
SMG1-206ENST00000562668 A6NJR5 290 aa9.13□□□□□ -0.95
SMG1-206ENST00000562668 EML1O00423 815 aa9.13□□□□□ -0.95
SMG1-206ENST00000562668 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
SMG1-206ENST00000562668 GPC6Q9Y625 555 aaPredicted RBP9.13□□□□□ -0.95
SMG1-206ENST00000562668 SERTM1A2A2V5 107 aa9.12□□□□□ -0.95
SMG1-206ENST00000562668 PSMA6P60900 246 aaKnown RBP9.12□□□□□ -0.95
SMG1-206ENST00000562668 SNRPNP63162 240 aaKnown RBP9.12□□□□□ -0.95
SMG1-206ENST00000562668 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
SMG1-206ENST00000562668 EFSO43281 561 aa9.11□□□□□ -0.95
SMG1-206ENST00000562668 EPXP11678 715 aa9.11□□□□□ -0.95
SMG1-206ENST00000562668 SH3PXD2AQ5TCZ1 1133 aa9.11□□□□□ -0.95
SMG1-206ENST00000562668 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
SMG1-206ENST00000562668 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
SMG1-206ENST00000562668 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
SMG1-206ENST00000562668 RBM19Q9Y4C8 960 aaKnown RBP9.11□□□□□ -0.95
SMG1-206ENST00000562668 NEURL1BA8MQ27 555 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 DKK1O94907 266 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 AMPD1P23109 780 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 ADH6P28332 368 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 HIRAP54198 1017 aaPredicted RBP9.1□□□□□ -0.95
SMG1-206ENST00000562668 LAMC2Q13753 1193 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 GPAT2Q6NUI2 795 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
SMG1-206ENST00000562668 DCAF5Q96JK2 942 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms