RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 KCNA3P22001 575 aa9.98□□□□□ -0.81
CNEP1R1-204ENST00000562576 USP47Q96K76 1375 aa9.98□□□□□ -0.81
CNEP1R1-204ENST00000562576 C5P01031 1676 aa9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 FCHSD2O94868 740 aa9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 USHBP1Q8N6Y0 703 aa9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 LINC00116Q8NCU8 138 aa9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 MEGF6O75095 1541 aa9.97□□□□□ -0.81
CNEP1R1-204ENST00000562576 STK25O00506 426 aa9.96□□□□□ -0.82
CNEP1R1-204ENST00000562576 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.82
CNEP1R1-204ENST00000562576 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
CNEP1R1-204ENST00000562576 RNF181Q9P0P0 153 aa9.96□□□□□ -0.82
CNEP1R1-204ENST00000562576 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
CNEP1R1-204ENST00000562576 FLAD1Q8NFF5 587 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 AK7Q96M32 723 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 TTC21AQ8NDW8 1320 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 PALLDQ8WX93 1383 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 C4BP0C0L5 1744 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 LTN1O94822 1766 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 TAF1LQ8IZX4 1826 aa9.95□□□□□ -0.82
CNEP1R1-204ENST00000562576 RGPD2P0DJD1 1756 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 ECM2O94769 699 aaPredicted RBP9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 ITPK1Q13572 414 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 ARSIQ5FYB1 569 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 SMC1BQ8NDV3 1235 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 IP6K1Q92551 441 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 MFRPQ9BY79 579 aa9.94□□□□□ -0.82
CNEP1R1-204ENST00000562576 UBR3Q6ZT12 1888 aa9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 USP31Q70CQ4 1352 aa9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 POTECB2RU33 542 aa9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 TNRC18O15417 2968 aaPredicted RBP9.93□□□□□ -0.82
CNEP1R1-204ENST00000562576 SBNO2Q9Y2G9 1366 aa9.92□□□□□ -0.82
CNEP1R1-204ENST00000562576 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
CNEP1R1-204ENST00000562576 RASSF7Q02833 373 aa9.92□□□□□ -0.82
CNEP1R1-204ENST00000562576 KDM2BQ8NHM5 1336 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 GNPATO15228 680 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 CHRNA5P30532 468 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 LBX1P52954 281 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 TGFB2P61812 414 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 PIGBQ92521 554 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 ABHD8Q96I13 439 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
CNEP1R1-204ENST00000562576 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
CNEP1R1-204ENST00000562576 EVC2Q86UK5 1308 aa9.9□□□□□ -0.82
CNEP1R1-204ENST00000562576 CYP27B1O15528 508 aa9.9□□□□□ -0.82
CNEP1R1-204ENST00000562576 DCAF5Q96JK2 942 aa9.9□□□□□ -0.82
CNEP1R1-204ENST00000562576 KIF13BQ9NQT8 1826 aa9.9□□□□□ -0.82
CNEP1R1-204ENST00000562576 C10orf71Q711Q0 1435 aa9.9□□□□□ -0.83
CNEP1R1-204ENST00000562576 RAB3GAP2Q9H2M9 1393 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 MAP3K19Q56UN5 1328 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 SSFA2P28290 1259 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 HOXC9P31274 260 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 ASAP1Q9ULH1 1129 aa9.89□□□□□ -0.83
CNEP1R1-204ENST00000562576 KIAA1210Q9ULL0 1709 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 BRCA1P38398 1863 aaKnown RBP9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 LOC102724428A0A0B4J2F2 783 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 SIK1P57059 783 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 SLC4A9Q96Q91 983 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 PRDM10Q9NQV6 1147 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 PLEKHG2Q9H7P9 1386 aa9.88□□□□□ -0.83
CNEP1R1-204ENST00000562576 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 VEGFAP15692 232 aaPredicted RBP9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 VEGFBP49765 207 aa9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 TMF1P82094 1093 aa9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 NSD3Q9BZ95 1437 aa9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 SBF1O95248 1867 aa9.87□□□□□ -0.83
CNEP1R1-204ENST00000562576 MAP2P11137 1827 aaKnown RBP9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 GYS1P13807 737 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 PBX2P40425 430 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 MLLT1Q03111 559 aaPredicted RBP9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 DDR1Q08345 913 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 DALRD3Q5D0E6 543 aaKnown RBP9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 MON2Q7Z3U7 1717 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 TNRC6CQ9HCJ0 1690 aaKnown RBP9.86□□□□□ -0.83
CNEP1R1-204ENST00000562576 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 HSPA8P11142 646 aaKnown RBP9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 CTCFP49711 727 aaPredicted RBP9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 RRS1Q15050 365 aaKnown RBP9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 SRP68Q9UHB9 627 aaKnown RBP9.85□□□□□ -0.83
CNEP1R1-204ENST00000562576 ITGB4P16144 1822 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 AMPHP49418 695 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 RGS19P49795 217 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 ATG3Q9NT62 314 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 C4AP0C0L4 1744 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms