RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 MEIS3Q99687 375 aa11.98□□□□□ -0.49
CDH13-205ENST00000562307 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
CDH13-205ENST00000562307 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 ATP10DQ9P241 1426 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 ADCY9O60503 1353 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 GNAI3P08754 354 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 BEND3Q5T5X7 828 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 LRP10Q7Z4F1 713 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
CDH13-205ENST00000562307 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
CDH13-205ENST00000562307 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 BCL9LQ86UU0 1499 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 WNK3Q9BYP7 1800 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 ANXA1P04083 346 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 NUCB1Q02818 461 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 VPS72Q15906 364 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 UBR2Q8IWV8 1755 aa11.96□□□□□ -0.49
CDH13-205ENST00000562307 TOGARAM1Q9Y4F4 1720 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 C5P01031 1676 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 DDX58O95786 925 aaKnown RBP11.95□□□□□ -0.5
CDH13-205ENST00000562307 GNAI2P04899 355 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 PDE4AP27815 886 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 PIGBQ92521 554 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 BACH2Q9BYV9 841 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
CDH13-205ENST00000562307 BCL9O00512 1426 aa11.94□□□□□ -0.5
CDH13-205ENST00000562307 RGS3P49796 1198 aa11.94□□□□□ -0.5
CDH13-205ENST00000562307 DDB1Q16531 1140 aa11.94□□□□□ -0.5
CDH13-205ENST00000562307 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
CDH13-205ENST00000562307 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
CDH13-205ENST00000562307 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
CDH13-205ENST00000562307 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
CDH13-205ENST00000562307 MAP3K2Q9Y2U5 619 aa11.93□□□□□ -0.5
CDH13-205ENST00000562307 HSPA1LP34931 641 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 COPS6Q7L5N1 327 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
CDH13-205ENST00000562307 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 C8orf37Q96NL8 207 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 LAMB4A4D0S4 1761 aa11.92□□□□□ -0.5
CDH13-205ENST00000562307 UTYO14607 1347 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 NBPF26B4DH59 902 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
CDH13-205ENST00000562307 HMMRO75330 724 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
CDH13-205ENST00000562307 MYL6BP14649 208 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 NBPF10Q6P3W6 841 aaKnown RBP11.91□□□□□ -0.5
CDH13-205ENST00000562307 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 NBPF15Q8N660 670 aa11.91□□□□□ -0.5
CDH13-205ENST00000562307 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
CDH13-205ENST00000562307 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
CDH13-205ENST00000562307 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
CDH13-205ENST00000562307 CCDC9Q9Y3X0 531 aaKnown RBP11.9□□□□□ -0.5
CDH13-205ENST00000562307 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
CDH13-205ENST00000562307 ITGB4P16144 1822 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
CDH13-205ENST00000562307 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
CDH13-205ENST00000562307 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 PLBD2Q8NHP8 589 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 SSH3Q8TE77 659 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 USP21Q9UK80 565 aa11.89□□□□□ -0.51
CDH13-205ENST00000562307 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
CDH13-205ENST00000562307 A1BGP04217 495 aa11.88□□□□□ -0.51
CDH13-205ENST00000562307 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
CDH13-205ENST00000562307 MTX1Q13505 466 aa11.88□□□□□ -0.51
CDH13-205ENST00000562307 POLA2Q14181 598 aa11.88□□□□□ -0.51
CDH13-205ENST00000562307 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
CDH13-205ENST00000562307 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
CDH13-205ENST00000562307 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
CDH13-205ENST00000562307 STARD3NLO95772 234 aa11.87□□□□□ -0.51
CDH13-205ENST00000562307 NEXNQ0ZGT2 675 aa11.87□□□□□ -0.51
CDH13-205ENST00000562307 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
CDH13-205ENST00000562307 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
CDH13-205ENST00000562307 DNAJC10Q8IXB1 793 aa11.87□□□□□ -0.51
CDH13-205ENST00000562307 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
CDH13-205ENST00000562307 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
CDH13-205ENST00000562307 GRM8O00222 908 aa11.86□□□□□ -0.51
CDH13-205ENST00000562307 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
CDH13-205ENST00000562307 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
CDH13-205ENST00000562307 GCKRQ14397 625 aa11.86□□□□□ -0.51
CDH13-205ENST00000562307 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
CDH13-205ENST00000562307 COL15A1P39059 1388 aa11.86□□□□□ -0.51
CDH13-205ENST00000562307 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms