RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PTF1AQ7RTS3 328 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 SPG7Q9UQ90 795 aa14.69□□□□□ -0.06
PCAT1-202ENST00000561978 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
PCAT1-202ENST00000561978 MBIPQ9NS73 344 aa14.68□□□□□ -0.06
PCAT1-202ENST00000561978 SBF2Q86WG5 1849 aa14.68□□□□□ -0.06
PCAT1-202ENST00000561978 DLG5Q8TDM6 1919 aa14.67□□□□□ -0.06
PCAT1-202ENST00000561978 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCAT1-202ENST00000561978 HDAC1Q13547 482 aaPredicted RBP14.67□□□□□ -0.06
PCAT1-202ENST00000561978 KCNQ2O43526 872 aa14.67□□□□□ -0.06
PCAT1-202ENST00000561978 PLEKHO1Q53GL0 409 aaPredicted RBP14.67□□□□□ -0.06
PCAT1-202ENST00000561978 THUMPD2Q9BTF0 503 aaKnown RBP14.67□□□□□ -0.06
PCAT1-202ENST00000561978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCAT1-202ENST00000561978 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
PCAT1-202ENST00000561978 PDIA4P13667 645 aaKnown RBP14.66□□□□□ -0.06
PCAT1-202ENST00000561978 ZNF530Q6P9A1 599 aaPredicted RBP14.66□□□□□ -0.06
PCAT1-202ENST00000561978 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
PCAT1-202ENST00000561978 PHKG2P15735 406 aa14.65□□□□□ -0.06
PCAT1-202ENST00000561978 TWISTNBQ3B726 338 aaPredicted RBP14.65□□□□□ -0.06
PCAT1-202ENST00000561978 AMOTQ4VCS5 1084 aa14.65□□□□□ -0.06
PCAT1-202ENST00000561978 TMEM57Q8N5G2 664 aa14.65□□□□□ -0.06
PCAT1-202ENST00000561978 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
PCAT1-202ENST00000561978 MTHFSDQ2M296 383 aaKnown RBP14.65□□□□□ -0.06
PCAT1-202ENST00000561978 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
PCAT1-202ENST00000561978 ANO8Q9HCE9 1232 aaPredicted RBP14.65□□□□□ -0.06
PCAT1-202ENST00000561978 ZBTB40Q9NUA8 1239 aa14.64□□□□□ -0.07
PCAT1-202ENST00000561978 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
PCAT1-202ENST00000561978 DEFB132Q7Z7B7 95 aa14.64□□□□□ -0.07
PCAT1-202ENST00000561978 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
PCAT1-202ENST00000561978 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
PCAT1-202ENST00000561978 BCL9O00512 1426 aa14.63□□□□□ -0.07
PCAT1-202ENST00000561978 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
PCAT1-202ENST00000561978 SF3B2Q13435 895 aaKnown RBP14.63□□□□□ -0.07
PCAT1-202ENST00000561978 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
PCAT1-202ENST00000561978 API5Q9BZZ5 524 aaKnown RBP14.63□□□□□ -0.07
PCAT1-202ENST00000561978 CHL1O00533 1208 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 APBA3O96018 575 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 TSPYL6Q8N831 410 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 TNS1Q9HBL0 1735 aaKnown RBP14.62□□□□□ -0.07
PCAT1-202ENST00000561978 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
PCAT1-202ENST00000561978 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
PCAT1-202ENST00000561978 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
PCAT1-202ENST00000561978 TOGARAM1Q9Y4F4 1720 aa14.62□□□□□ -0.07
PCAT1-202ENST00000561978 PLEKHG2Q9H7P9 1386 aa14.61□□□□□ -0.07
PCAT1-202ENST00000561978 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
PCAT1-202ENST00000561978 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
PCAT1-202ENST00000561978 CCDC125Q86Z20 511 aa14.61□□□□□ -0.07
PCAT1-202ENST00000561978 C8orf58Q8NAV2 365 aa14.61□□□□□ -0.07
PCAT1-202ENST00000561978 EN1Q05925 392 aaPredicted RBP14.6□□□□□ -0.07
PCAT1-202ENST00000561978 DCTN1Q14203 1278 aa14.6□□□□□ -0.07
PCAT1-202ENST00000561978 NHSQ6T4R5 1651 aa14.6□□□□□ -0.07
PCAT1-202ENST00000561978 ELL2O00472 640 aaPredicted RBP14.6□□□□□ -0.07
PCAT1-202ENST00000561978 AKAP4Q5JQC9 854 aa14.6□□□□□ -0.07
PCAT1-202ENST00000561978 SMC5Q8IY18 1101 aa14.6□□□□□ -0.07
PCAT1-202ENST00000561978 ITGB4P16144 1822 aa14.59□□□□□ -0.07
PCAT1-202ENST00000561978 KDM6AO15550 1401 aaPredicted RBP14.59□□□□□ -0.07
PCAT1-202ENST00000561978 BTAF1O14981 1849 aa14.59□□□□□ -0.07
PCAT1-202ENST00000561978 DCAF5Q96JK2 942 aa14.59□□□□□ -0.07
PCAT1-202ENST00000561978 VIRMAQ69YN4 1812 aaKnown RBP14.59□□□□□ -0.07
PCAT1-202ENST00000561978 ZBTB7BO15156 539 aaPredicted RBP14.58□□□□□ -0.07
PCAT1-202ENST00000561978 LGR6Q9HBX8 967 aa14.58□□□□□ -0.07
PCAT1-202ENST00000561978 ABCC4O15439 1325 aa14.58□□□□□ -0.08
PCAT1-202ENST00000561978 BAG6P46379 1132 aa14.58□□□□□ -0.08
PCAT1-202ENST00000561978 MCM10Q7L590 875 aa14.58□□□□□ -0.08
PCAT1-202ENST00000561978 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
PCAT1-202ENST00000561978 EZH2Q15910 746 aaKnown RBP14.57□□□□□ -0.08
PCAT1-202ENST00000561978 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 PIGBQ92521 554 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
PCAT1-202ENST00000561978 MAP3K5Q99683 1374 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 NFATC2IPQ8NCF5 419 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 GCC1Q96CN9 775 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 TMOD3Q9NYL9 352 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
PCAT1-202ENST00000561978 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
PCAT1-202ENST00000561978 CABP4P57796 275 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 PTPRCP08575 1304 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 ERVV-2B6SEH9 535 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 BABAM1Q9NWV8 329 aa14.54□□□□□ -0.08
PCAT1-202ENST00000561978 NUCB1Q02818 461 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 PLSCR1O15162 318 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 KCNQ4P56696 695 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 PDE4CQ08493 712 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
PCAT1-202ENST00000561978 PROM2Q8N271 834 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 TSPYL4Q9UJ04 414 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 ASAP1Q9ULH1 1129 aa14.53□□□□□ -0.08
PCAT1-202ENST00000561978 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.08
PCAT1-202ENST00000561978 SLC52A2Q9HAB3 445 aa14.52□□□□□ -0.09
PCAT1-202ENST00000561978 ADAMTS7Q9UKP4 1686 aa14.51□□□□□ -0.09
PCAT1-202ENST00000561978 TXNRD1Q16881 649 aa14.51□□□□□ -0.09
PCAT1-202ENST00000561978 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
PCAT1-202ENST00000561978 TEFQ10587 303 aa14.5□□□□□ -0.09
PCAT1-202ENST00000561978 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
PCAT1-202ENST00000561978 PALLDQ8WX93 1383 aa14.5□□□□□ -0.09
PCAT1-202ENST00000561978 SLC39A6Q13433 755 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms