RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 C10orf71Q711Q0 1435 aa33.8■■■■□ 3
MSLN-203ENST00000561896 ZPR1O75312 459 aa33.8■■■■□ 3
MSLN-203ENST00000561896 TGFB2P61812 414 aa33.79■■■■□ 3
MSLN-203ENST00000561896 COL15A1P39059 1388 aa33.79■■■■□ 3
MSLN-203ENST00000561896 FKBP8Q14318 412 aa33.78■■■■□ 3
MSLN-203ENST00000561896 PLEKHF1Q96S99 279 aa33.78■■■■□ 3
MSLN-203ENST00000561896 NARFQ9UHQ1 456 aa33.78■■■■□ 3
MSLN-203ENST00000561896 DLG5Q8TDM6 1919 aa33.77■■■■□ 3
MSLN-203ENST00000561896 MCM10Q7L590 875 aa33.77■■■■□ 3
MSLN-203ENST00000561896 KIAA1551Q9HCM1 1747 aa33.76■■■■□ 3
MSLN-203ENST00000561896 EIF5P55010 431 aaKnown RBP33.74■■■□□ 2.99
MSLN-203ENST00000561896 USPL1Q5W0Q7 1092 aa33.74■■■□□ 2.99
MSLN-203ENST00000561896 ZNF784Q8NCA9 323 aaPredicted RBP33.74■■■□□ 2.99
MSLN-203ENST00000561896 PXDNLA1KZ92 1463 aa33.74■■■□□ 2.99
MSLN-203ENST00000561896 A0A087WZG4 1122 aa33.73■■■□□ 2.99
MSLN-203ENST00000561896 TM4SF1P30408 202 aa33.73■■■□□ 2.99
MSLN-203ENST00000561896 MYBBP1AQ9BQG0 1328 aaKnown RBP33.73■■■□□ 2.99
MSLN-203ENST00000561896 CANXP27824 592 aaKnown RBP33.72■■■□□ 2.99
MSLN-203ENST00000561896 KCNQ3O43525 872 aa33.71■■■□□ 2.99
MSLN-203ENST00000561896 DDR1Q08345 913 aa33.71■■■□□ 2.99
MSLN-203ENST00000561896 N4BP2Q86UW6 1770 aaPredicted RBP33.7■■■□□ 2.99
MSLN-203ENST00000561896 DCTN1Q14203 1278 aa33.7■■■□□ 2.99
MSLN-203ENST00000561896 TAF7Q15545 349 aaPredicted RBP33.7■■■□□ 2.99
MSLN-203ENST00000561896 NFE2L2Q16236 605 aa33.7■■■□□ 2.99
MSLN-203ENST00000561896 IL6STP40189 918 aaPredicted RBP33.69■■■□□ 2.98
MSLN-203ENST00000561896 POLRMTO00411 1230 aaKnown RBP33.68■■■□□ 2.98
MSLN-203ENST00000561896 ZEB1P37275 1124 aaPredicted RBP33.68■■■□□ 2.98
MSLN-203ENST00000561896 MAPK8IP3Q9UPT6 1336 aa33.68■■■□□ 2.98
MSLN-203ENST00000561896 BRCA1P38398 1863 aaKnown RBP33.67■■■□□ 2.98
MSLN-203ENST00000561896 SNRPA1P09661 255 aaKnown RBP33.66■■■□□ 2.98
MSLN-203ENST00000561896 BCL2L12Q9HB09 334 aa33.66■■■□□ 2.98
MSLN-203ENST00000561896 PNISRQ8TF01 805 aaKnown RBP33.65■■■□□ 2.98
MSLN-203ENST00000561896 NRXN2Q9P2S2 1712 aa33.65■■■□□ 2.98
MSLN-203ENST00000561896 NFIXQ14938 502 aa33.64■■■□□ 2.98
MSLN-203ENST00000561896 AFDNP55196 1824 aaKnown RBP33.63■■■□□ 2.97
MSLN-203ENST00000561896 A0A0G2JLW4 131 aa33.63■■■□□ 2.97
MSLN-203ENST00000561896 SCN7AQ01118 1682 aa33.62■■■□□ 2.97
MSLN-203ENST00000561896 DPEP1P16444 411 aa33.62■■■□□ 2.97
MSLN-203ENST00000561896 USP16Q9Y5T5 823 aa33.62■■■□□ 2.97
MSLN-203ENST00000561896 A1BGP04217 495 aa33.61■■■□□ 2.97
MSLN-203ENST00000561896 NPM2Q86SE8 214 aaKnown RBP33.61■■■□□ 2.97
MSLN-203ENST00000561896 KDM3BQ7LBC6 1761 aa33.6■■■□□ 2.97
MSLN-203ENST00000561896 KCNA3P22001 575 aa33.58■■■□□ 2.97
MSLN-203ENST00000561896 WWC3Q9ULE0 1092 aa33.58■■■□□ 2.97
MSLN-203ENST00000561896 PRKRIP1Q9H875 184 aaPredicted RBP33.57■■■□□ 2.96
MSLN-203ENST00000561896 ARFGEF1Q9Y6D6 1849 aa33.57■■■□□ 2.96
MSLN-203ENST00000561896 SERPINB2P05120 415 aa33.56■■■□□ 2.96
MSLN-203ENST00000561896 LAMB4A4D0S4 1761 aa33.55■■■□□ 2.96
MSLN-203ENST00000561896 PRAMEF22A3QJZ6 481 aa33.55■■■□□ 2.96
MSLN-203ENST00000561896 PIM2Q9P1W9 311 aa33.55■■■□□ 2.96
MSLN-203ENST00000561896 TBC1D2BQ9UPU7 963 aa33.55■■■□□ 2.96
MSLN-203ENST00000561896 BCS1LQ9Y276 419 aa33.55■■■□□ 2.96
MSLN-203ENST00000561896 ZNF330Q9Y3S2 320 aaPredicted RBP33.55■■■□□ 2.96
MSLN-203ENST00000561896 MIS18AQ9NYP9 233 aa33.54■■■□□ 2.96
MSLN-203ENST00000561896 BCORQ6W2J9 1755 aa33.54■■■□□ 2.96
MSLN-203ENST00000561896 ADCY9O60503 1353 aa33.52■■■□□ 2.96
MSLN-203ENST00000561896 RGL2O15211 777 aa33.52■■■□□ 2.96
MSLN-203ENST00000561896 CAMTA2O94983 1202 aa33.52■■■□□ 2.96
MSLN-203ENST00000561896 RIPK4P57078 832 aa33.52■■■□□ 2.96
MSLN-203ENST00000561896 LMOD3Q0VAK6 560 aa33.52■■■□□ 2.96
MSLN-203ENST00000561896 TMPOP42166 694 aaKnown RBP33.51■■■□□ 2.95
MSLN-203ENST00000561896 TBC1D9BQ66K14 1250 aa33.51■■■□□ 2.95
MSLN-203ENST00000561896 DZIP3Q86Y13 1208 aaKnown RBP33.51■■■□□ 2.95
MSLN-203ENST00000561896 THUMPD2Q9BTF0 503 aaKnown RBP33.51■■■□□ 2.95
MSLN-203ENST00000561896 CARMIL3Q8ND23 1372 aa33.49■■■□□ 2.95
MSLN-203ENST00000561896 GIGYF1O75420 1035 aaPredicted RBP33.49■■■□□ 2.95
MSLN-203ENST00000561896 EIF4A1P60842 406 aaKnown RBP33.49■■■□□ 2.95
MSLN-203ENST00000561896 WDR43Q15061 677 aaKnown RBP eCLIP33.49■■■□□ 2.95
MSLN-203ENST00000561896 DALRD3Q5D0E6 543 aaKnown RBP33.49■■■□□ 2.95
MSLN-203ENST00000561896 CLEC4GQ6UXB4 293 aa33.49■■■□□ 2.95
MSLN-203ENST00000561896 BABAM1Q9NWV8 329 aa33.49■■■□□ 2.95
MSLN-203ENST00000561896 DLEC1Q9Y238 1755 aa33.47■■■□□ 2.95
MSLN-203ENST00000561896 NBPF26B4DH59 902 aa33.47■■■□□ 2.95
MSLN-203ENST00000561896 NBPF10Q6P3W6 841 aaKnown RBP33.47■■■□□ 2.95
MSLN-203ENST00000561896 BICDL1Q6ZP65 573 aa33.47■■■□□ 2.95
MSLN-203ENST00000561896 NBPF15Q8N660 670 aa33.47■■■□□ 2.95
MSLN-203ENST00000561896 CHRNA5P30532 468 aa33.46■■■□□ 2.95
MSLN-203ENST00000561896 RUNDC1Q96C34 613 aa33.46■■■□□ 2.95
MSLN-203ENST00000561896 ATP10DQ9P241 1426 aa33.45■■■□□ 2.95
MSLN-203ENST00000561896 SETDB2Q96T68 719 aa33.45■■■□□ 2.95
MSLN-203ENST00000561896 PDZRN3Q9UPQ7 1066 aa33.45■■■□□ 2.95
MSLN-203ENST00000561896 PIP4K2AP48426 406 aaPredicted RBP33.44■■■□□ 2.94
MSLN-203ENST00000561896 ZNF652Q9Y2D9 606 aa33.44■■■□□ 2.94
MSLN-203ENST00000561896 ADAMTS8Q9UP79 889 aa33.43■■■□□ 2.94
MSLN-203ENST00000561896 ARHGAP27Q6ZUM4 889 aa33.42■■■□□ 2.94
MSLN-203ENST00000561896 BRIP1Q9BX63 1249 aa33.41■■■□□ 2.94
MSLN-203ENST00000561896 TSPYL4Q9UJ04 414 aa33.41■■■□□ 2.94
MSLN-203ENST00000561896 ANKRD31Q8N7Z5 1873 aa33.41■■■□□ 2.94
MSLN-203ENST00000561896 PRR5LQ6MZQ0 368 aa33.4■■■□□ 2.94
MSLN-203ENST00000561896 CCDC146Q8IYE0 955 aa33.4■■■□□ 2.94
MSLN-203ENST00000561896 H0YIN7 160 aa33.39■■■□□ 2.94
MSLN-203ENST00000561896 ERBB4Q15303 1308 aa33.38■■■□□ 2.93
MSLN-203ENST00000561896 PDE6BP35913 854 aa33.38■■■□□ 2.93
MSLN-203ENST00000561896 C2CD5Q86YS7 1000 aa33.37■■■□□ 2.93
MSLN-203ENST00000561896 CNBD1Q8NA66 436 aa33.37■■■□□ 2.93
MSLN-203ENST00000561896 RRP7AQ9Y3A4 280 aaKnown RBP33.36■■■□□ 2.93
MSLN-203ENST00000561896 TTLL6Q8N841 843 aa33.35■■■□□ 2.93
MSLN-203ENST00000561896 GPBP1L1Q9HC44 474 aaPredicted RBP33.34■■■□□ 2.93
MSLN-203ENST00000561896 TRIM35Q9UPQ4 493 aa33.34■■■□□ 2.93
MSLN-203ENST00000561896 ERVV-1B6SEH8 477 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms