RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 SCN7AQ01118 1682 aa18.04■□□□□ 0.48
USB1-205ENST00000561743 HEG1Q9ULI3 1381 aa18.04■□□□□ 0.48
USB1-205ENST00000561743 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
USB1-205ENST00000561743 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
USB1-205ENST00000561743 DDR1Q08345 913 aa18.03■□□□□ 0.48
USB1-205ENST00000561743 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
USB1-205ENST00000561743 TGFB2P61812 414 aa18.02■□□□□ 0.48
USB1-205ENST00000561743 ZPR1O75312 459 aa18.01■□□□□ 0.47
USB1-205ENST00000561743 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
USB1-205ENST00000561743 BCORQ6W2J9 1755 aa18■□□□□ 0.47
USB1-205ENST00000561743 A0A0G2JLW4 131 aa18■□□□□ 0.47
USB1-205ENST00000561743 BTBD11A6QL63 1104 aa18■□□□□ 0.47
USB1-205ENST00000561743 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
USB1-205ENST00000561743 KCNQ3O43525 872 aa18■□□□□ 0.47
USB1-205ENST00000561743 STARD3NLO95772 234 aa18■□□□□ 0.47
USB1-205ENST00000561743 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
USB1-205ENST00000561743 TM4SF1P30408 202 aa18■□□□□ 0.47
USB1-205ENST00000561743 MCM10Q7L590 875 aa18■□□□□ 0.47
USB1-205ENST00000561743 FMNL2Q96PY5 1086 aa18■□□□□ 0.47
USB1-205ENST00000561743 KDM3BQ7LBC6 1761 aa17.99■□□□□ 0.47
USB1-205ENST00000561743 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
USB1-205ENST00000561743 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
USB1-205ENST00000561743 DPEP1P16444 411 aa17.98■□□□□ 0.47
USB1-205ENST00000561743 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
USB1-205ENST00000561743 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
USB1-205ENST00000561743 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
USB1-205ENST00000561743 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
USB1-205ENST00000561743 ADCY9O60503 1353 aa17.98■□□□□ 0.47
USB1-205ENST00000561743 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
USB1-205ENST00000561743 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
USB1-205ENST00000561743 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
USB1-205ENST00000561743 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
USB1-205ENST00000561743 KCNA3P22001 575 aa17.96■□□□□ 0.47
USB1-205ENST00000561743 NFIXQ14938 502 aa17.96■□□□□ 0.47
USB1-205ENST00000561743 ANKRD31Q8N7Z5 1873 aa17.95■□□□□ 0.46
USB1-205ENST00000561743 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
USB1-205ENST00000561743 BCS1LQ9Y276 419 aa17.95■□□□□ 0.46
USB1-205ENST00000561743 A0A087WZG4 1122 aa17.94■□□□□ 0.46
USB1-205ENST00000561743 A1BGP04217 495 aa17.94■□□□□ 0.46
USB1-205ENST00000561743 RALBP1Q15311 655 aa17.94■□□□□ 0.46
USB1-205ENST00000561743 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
USB1-205ENST00000561743 NEFMP07197 916 aa17.93■□□□□ 0.46
USB1-205ENST00000561743 IL6STP40189 918 aaPredicted RBP17.93■□□□□ 0.46
USB1-205ENST00000561743 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
USB1-205ENST00000561743 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
USB1-205ENST00000561743 SERPINB2P05120 415 aa17.91■□□□□ 0.46
USB1-205ENST00000561743 CHRNA5P30532 468 aa17.91■□□□□ 0.46
USB1-205ENST00000561743 TAF7Q15545 349 aaPredicted RBP17.91■□□□□ 0.46
USB1-205ENST00000561743 PIM2Q9P1W9 311 aa17.91■□□□□ 0.46
USB1-205ENST00000561743 TBC1D2BQ9UPU7 963 aa17.91■□□□□ 0.46
USB1-205ENST00000561743 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
USB1-205ENST00000561743 SBF1O95248 1867 aa17.9■□□□□ 0.46
USB1-205ENST00000561743 COL11A2P13942 1736 aaPredicted RBP17.9■□□□□ 0.46
USB1-205ENST00000561743 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
USB1-205ENST00000561743 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
USB1-205ENST00000561743 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
USB1-205ENST00000561743 NFE2L2Q16236 605 aa17.9■□□□□ 0.46
USB1-205ENST00000561743 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
USB1-205ENST00000561743 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
USB1-205ENST00000561743 C1QTNF8P60827 252 aa17.89■□□□□ 0.45
USB1-205ENST00000561743 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
USB1-205ENST00000561743 MYBBP1AQ9BQG0 1328 aaKnown RBP17.89■□□□□ 0.45
USB1-205ENST00000561743 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
USB1-205ENST00000561743 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
USB1-205ENST00000561743 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
USB1-205ENST00000561743 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
USB1-205ENST00000561743 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
USB1-205ENST00000561743 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
USB1-205ENST00000561743 CACNA1SQ13698 1873 aa17.87■□□□□ 0.45
USB1-205ENST00000561743 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
USB1-205ENST00000561743 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
USB1-205ENST00000561743 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
USB1-205ENST00000561743 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
USB1-205ENST00000561743 NBPF26B4DH59 902 aa17.85■□□□□ 0.45
USB1-205ENST00000561743 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
USB1-205ENST00000561743 NBPF10Q6P3W6 841 aaKnown RBP17.85■□□□□ 0.45
USB1-205ENST00000561743 NBPF15Q8N660 670 aa17.85■□□□□ 0.45
USB1-205ENST00000561743 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
USB1-205ENST00000561743 NUP98P52948 1817 aa17.84■□□□□ 0.45
USB1-205ENST00000561743 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
USB1-205ENST00000561743 EIF4A1P60842 406 aaKnown RBP17.83■□□□□ 0.44
USB1-205ENST00000561743 PRR5LQ6MZQ0 368 aa17.83■□□□□ 0.44
USB1-205ENST00000561743 C2CD5Q86YS7 1000 aa17.82■□□□□ 0.44
USB1-205ENST00000561743 SETDB2Q96T68 719 aa17.82■□□□□ 0.44
USB1-205ENST00000561743 RIPK4P57078 832 aa17.81■□□□□ 0.44
USB1-205ENST00000561743 CLEC4GQ6UXB4 293 aa17.81■□□□□ 0.44
USB1-205ENST00000561743 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
USB1-205ENST00000561743 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
USB1-205ENST00000561743 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
USB1-205ENST00000561743 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
USB1-205ENST00000561743 H0YIN7 160 aa17.8■□□□□ 0.44
USB1-205ENST00000561743 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
USB1-205ENST00000561743 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
USB1-205ENST00000561743 TTLL6Q8N841 843 aa17.8■□□□□ 0.44
USB1-205ENST00000561743 CNBD1Q8NA66 436 aa17.8■□□□□ 0.44
USB1-205ENST00000561743 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
USB1-205ENST00000561743 RGL2O15211 777 aa17.79■□□□□ 0.44
USB1-205ENST00000561743 PDE6BP35913 854 aa17.79■□□□□ 0.44
USB1-205ENST00000561743 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
USB1-205ENST00000561743 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms