RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CCER1Q8TC90 406 aaPredicted RBP11.4□□□□□ -0.58
PALB2-202ENST00000561514 NARFQ9UHQ1 456 aa11.4□□□□□ -0.58
PALB2-202ENST00000561514 COL15A1P39059 1388 aa11.4□□□□□ -0.59
PALB2-202ENST00000561514 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
PALB2-202ENST00000561514 DIAPH1O60610 1272 aaKnown RBP11.39□□□□□ -0.59
PALB2-202ENST00000561514 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
PALB2-202ENST00000561514 BCL2L12Q9HB09 334 aa11.39□□□□□ -0.59
PALB2-202ENST00000561514 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
PALB2-202ENST00000561514 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
PALB2-202ENST00000561514 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 HMOX1P09601 288 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 NFIXQ14938 502 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 C9orf131Q5VYM1 1079 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
PALB2-202ENST00000561514 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
PALB2-202ENST00000561514 ARFGEF1Q9Y6D6 1849 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 ZPR1O75312 459 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 CHRNA5P30532 468 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 APLP1P51693 650 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 EIF5P55010 431 aaKnown RBP11.37□□□□□ -0.59
PALB2-202ENST00000561514 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 CEMIPQ8WUJ3 1361 aa11.37□□□□□ -0.59
PALB2-202ENST00000561514 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
PALB2-202ENST00000561514 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
PALB2-202ENST00000561514 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
PALB2-202ENST00000561514 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 STARD3NLO95772 234 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 FSTL1Q12841 308 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
PALB2-202ENST00000561514 ZNF790Q6PG37 636 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 ZNF496Q96IT1 587 aaPredicted RBP11.34□□□□□ -0.59
PALB2-202ENST00000561514 RNF181Q9P0P0 153 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
PALB2-202ENST00000561514 A0A087WZG4 1122 aa11.33□□□□□ -0.6
PALB2-202ENST00000561514 ZBTB22O15209 634 aa11.33□□□□□ -0.6
PALB2-202ENST00000561514 SERPINB2P05120 415 aa11.33□□□□□ -0.6
PALB2-202ENST00000561514 PRELPP51888 382 aa11.33□□□□□ -0.6
PALB2-202ENST00000561514 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
PALB2-202ENST00000561514 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
PALB2-202ENST00000561514 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
PALB2-202ENST00000561514 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
PALB2-202ENST00000561514 PDZRN3Q9UPQ7 1066 aa11.32□□□□□ -0.6
PALB2-202ENST00000561514 SCN7AQ01118 1682 aa11.32□□□□□ -0.6
PALB2-202ENST00000561514 NFKBIEO00221 500 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 LMNB1P20700 586 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
PALB2-202ENST00000561514 RGL2O15211 777 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 CANXP27824 592 aaKnown RBP11.3□□□□□ -0.6
PALB2-202ENST00000561514 RASSF7Q02833 373 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 TEFQ10587 303 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 FMNL2Q96PY5 1086 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 BRIP1Q9BX63 1249 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 SIPA1L3O60292 1781 aaPredicted RBP11.3□□□□□ -0.6
PALB2-202ENST00000561514 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
PALB2-202ENST00000561514 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
PALB2-202ENST00000561514 GLTPD2A6NH11 291 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
PALB2-202ENST00000561514 AFDNP55196 1824 aaKnown RBP11.29□□□□□ -0.6
PALB2-202ENST00000561514 H0YIN7 160 aa11.28□□□□□ -0.6
PALB2-202ENST00000561514 U2SURPO15042 1029 aaKnown RBP11.28□□□□□ -0.6
PALB2-202ENST00000561514 KLRG1Q96E93 195 aa11.28□□□□□ -0.6
PALB2-202ENST00000561514 WDR90Q96KV7 1748 aa11.27□□□□□ -0.61
PALB2-202ENST00000561514 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
PALB2-202ENST00000561514 PDE6BP35913 854 aa11.27□□□□□ -0.61
PALB2-202ENST00000561514 C16orf71Q8IYS4 520 aaPredicted RBP11.27□□□□□ -0.61
PALB2-202ENST00000561514 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.61
PALB2-202ENST00000561514 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
PALB2-202ENST00000561514 SBF1O95248 1867 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 KLRG2A4D1S0 409 aaPredicted RBP11.26□□□□□ -0.61
PALB2-202ENST00000561514 POTECB2RU33 542 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 KCNQ3O43525 872 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 HTATSF1O43719 755 aaKnown RBP11.26□□□□□ -0.61
PALB2-202ENST00000561514 A1BGP04217 495 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 TBC1D2BQ9UPU7 963 aa11.26□□□□□ -0.61
PALB2-202ENST00000561514 BTBD11A6QL63 1104 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 VEGFAP15692 232 aaPredicted RBP11.25□□□□□ -0.61
PALB2-202ENST00000561514 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 CNBD1Q8NA66 436 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
PALB2-202ENST00000561514 COL11A2P13942 1736 aaPredicted RBP11.24□□□□□ -0.61
PALB2-202ENST00000561514 BCORQ6W2J9 1755 aa11.24□□□□□ -0.61
PALB2-202ENST00000561514 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
PALB2-202ENST00000561514 SRGNP10124 158 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms