RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	PALLD	Q8WX93	1383 aa		10.15	□□□□□ -0.79
ZEB1-223	ENST00000561304	NKX1-1	Q15270	411 aa	Predicted RBP	10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	MPRIP	Q6WCQ1	1025 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	MORC1	Q86VD1	984 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	AEBP1	Q8IUX7	1158 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	MTFR1L	Q9H019	292 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	CCNL1	Q9UK58	526 aa	Predicted RBP	10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	C4A	P0C0L4	1744 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	TJP1	Q07157	1748 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	COL3A1	P02461	1466 aa	Predicted RBP	10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	PER1	O15534	1290 aa	Predicted RBP	10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	PHKG2	P15735	406 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	KNSTRN	Q9Y448	316 aa		10.14	□□□□□ -0.79
ZEB1-223	ENST00000561304	ADAMTS7	Q9UKP4	1686 aa		10.13	□□□□□ -0.79
ZEB1-223	ENST00000561304	CIC	Q96RK0	1608 aa	Predicted RBP	10.13	□□□□□ -0.79
ZEB1-223	ENST00000561304	AMIGO3	Q86WK7	504 aa		10.13	□□□□□ -0.79
ZEB1-223	ENST00000561304	PIGB	Q92521	554 aa		10.13	□□□□□ -0.79
ZEB1-223	ENST00000561304	SPG7	Q9UQ90	795 aa		10.13	□□□□□ -0.79
ZEB1-223	ENST00000561304	KDR	P35968	1356 aa		10.12	□□□□□ -0.79
ZEB1-223	ENST00000561304	PLEKHG2	Q9H7P9	1386 aa		10.12	□□□□□ -0.79
ZEB1-223	ENST00000561304	SIPA1L3	O60292	1781 aa	Predicted RBP	10.12	□□□□□ -0.79
ZEB1-223	ENST00000561304	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.12	□□□□□ -0.79
ZEB1-223	ENST00000561304	IL13	P35225	146 aa		10.11	□□□□□ -0.79
ZEB1-223	ENST00000561304	CC2D1B	Q5T0F9	858 aa	Known RBP	10.11	□□□□□ -0.79
ZEB1-223	ENST00000561304	IFNL2	Q8IZJ0	200 aa		10.11	□□□□□ -0.79
ZEB1-223	ENST00000561304	TFCP2L1	Q9NZI6	479 aa		10.11	□□□□□ -0.79
ZEB1-223	ENST00000561304	UBR2	Q8IWV8	1755 aa		10.1	□□□□□ -0.79
ZEB1-223	ENST00000561304	SMIM5	Q71RC9	77 aa		10.1	□□□□□ -0.79
ZEB1-223	ENST00000561304	COL23A1	Q86Y22	540 aa	Predicted RBP	10.1	□□□□□ -0.79
ZEB1-223	ENST00000561304	MFRP	Q9BY79	579 aa		10.1	□□□□□ -0.79
ZEB1-223	ENST00000561304	ASAP1	Q9ULH1	1129 aa		10.1	□□□□□ -0.79
ZEB1-223	ENST00000561304	MTHFS	P49914	203 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	SULT6B1	Q6IMI4	303 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	LINC00116	Q8NCU8	138 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	FBXO22	Q8NEZ5	403 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	ARX	Q96QS3	562 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	SYT17	Q9BSW7	474 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	KIAA1551	Q9HCM1	1747 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	TMOD3	Q9NYL9	352 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	MAP3K5	Q99683	1374 aa		10.09	□□□□□ -0.79
ZEB1-223	ENST00000561304	MRC1	P22897	1456 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	KIF13B	Q9NQT8	1826 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304		G3V3G9	751 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	ITPK1	Q13572	414 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	CNGB1	Q14028	1251 aa	Predicted RBP	10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	MSL1	Q68DK7	614 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	DPY19L2	Q6NUT2	758 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	MS4A4A	Q96JQ5	239 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	ATG3	Q9NT62	314 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	NPC1L1	Q9UHC9	1359 aa		10.08	□□□□□ -0.8
ZEB1-223	ENST00000561304	LOC102724428	A0A0B4J2F2	783 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	SIK1	P57059	783 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	SLC16A10	Q8TF71	515 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	SMARCC1	Q92922	1105 aa	Predicted RBP	10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	SLC4A9	Q96Q91	983 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	BOLA1	Q9Y3E2	137 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	DLG5	Q8TDM6	1919 aa		10.07	□□□□□ -0.8
ZEB1-223	ENST00000561304	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.06	□□□□□ -0.8
ZEB1-223	ENST00000561304	HMOX1	P09601	288 aa		10.06	□□□□□ -0.8
ZEB1-223	ENST00000561304	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.06	□□□□□ -0.8
ZEB1-223	ENST00000561304	MMRN1	Q13201	1228 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	C3orf67	Q6ZVT6	689 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	NLGN2	Q8NFZ4	835 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	DCAF5	Q96JK2	942 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	AK7	Q96M32	723 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	BRCA1	P38398	1863 aa	Known RBP	10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	KCP	Q6ZWJ8	1503 aa		10.05	□□□□□ -0.8
ZEB1-223	ENST00000561304	ERVV-2	B6SEH9	535 aa		10.04	□□□□□ -0.8
ZEB1-223	ENST00000561304	PHF14	O94880	888 aa		10.04	□□□□□ -0.8
ZEB1-223	ENST00000561304	ATP6V1A	P38606	617 aa		10.04	□□□□□ -0.8
ZEB1-223	ENST00000561304	AMOT	Q4VCS5	1084 aa		10.04	□□□□□ -0.8
ZEB1-223	ENST00000561304	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.04	□□□□□ -0.8
ZEB1-223	ENST00000561304	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	HSP90AB1	P08238	724 aa	Known RBP	10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	POLD1	P28340	1107 aa		10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	C1orf141	Q5JVX7	400 aa		10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	RYDEN	Q9NUL5	291 aa	Known RBP	10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	AFDN	P55196	1824 aa	Known RBP	10.03	□□□□□ -0.8
ZEB1-223	ENST00000561304	DIAPH1	O60610	1272 aa	Known RBP	10.02	□□□□□ -0.8
ZEB1-223	ENST00000561304	YY1	P25490	414 aa		10.02	□□□□□ -0.8
ZEB1-223	ENST00000561304	CABP4	P57796	275 aa		10.02	□□□□□ -0.8
ZEB1-223	ENST00000561304	LGR6	Q9HBX8	967 aa		10.02	□□□□□ -0.8
ZEB1-223	ENST00000561304	GNPAT	O15228	680 aa		10.01	□□□□□ -0.81
ZEB1-223	ENST00000561304	SSFA2	P28290	1259 aa		10.01	□□□□□ -0.81
ZEB1-223	ENST00000561304	MTHFSD	Q2M296	383 aa	Known RBP	10.01	□□□□□ -0.81
ZEB1-223	ENST00000561304	NFATC2IP	Q8NCF5	419 aa		10.01	□□□□□ -0.81
ZEB1-223	ENST00000561304	AKAP4	Q5JQC9	854 aa		10.01	□□□□□ -0.81
ZEB1-223	ENST00000561304	RNMT	O43148	476 aa	Known RBP	10	□□□□□ -0.81
ZEB1-223	ENST00000561304	PTCD1	O75127	700 aa	Known RBP	10	□□□□□ -0.81
ZEB1-223	ENST00000561304	MICALL2	Q8IY33	904 aa		10	□□□□□ -0.81
ZEB1-223	ENST00000561304	SLAIN1	Q8ND83	568 aa		10	□□□□□ -0.81
ZEB1-223	ENST00000561304	FLAD1	Q8NFF5	587 aa		10	□□□□□ -0.81
ZEB1-223	ENST00000561304	SLC52A2	Q9HAB3	445 aa		10	□□□□□ -0.81
ZEB1-223	ENST00000561304	SCN7A	Q01118	1682 aa		9.99	□□□□□ -0.81
ZEB1-223	ENST00000561304	CNTNAP4	Q9C0A0	1308 aa		9.99	□□□□□ -0.81
ZEB1-223	ENST00000561304	U2SURP	O15042	1029 aa	Known RBP	9.99	□□□□□ -0.81
ZEB1-223	ENST00000561304	YBX3	P16989	372 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
ZEB1-223	ENST00000561304	PPP2R1A	P30153	589 aa		9.99	□□□□□ -0.81

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