RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	GAS2L2	Q8NHY3	880 aa		18.66	■□□□□ 0.58
IDH3A-222	ENST00000561279	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.66	■□□□□ 0.58
IDH3A-222	ENST00000561279	BRCA1	P38398	1863 aa	Known RBP	18.66	■□□□□ 0.58
IDH3A-222	ENST00000561279	CHRNA5	P30532	468 aa		18.65	■□□□□ 0.58
IDH3A-222	ENST00000561279	COL15A1	P39059	1388 aa		18.65	■□□□□ 0.58
IDH3A-222	ENST00000561279	ARFGEF1	Q9Y6D6	1849 aa		18.65	■□□□□ 0.58
IDH3A-222	ENST00000561279		A0A087WZG4	1122 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	GNAT3	A8MTJ3	354 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	CANX	P27824	592 aa	Known RBP	18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	APLP1	P51693	650 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	CNGB1	Q14028	1251 aa	Predicted RBP	18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	NFIX	Q14938	502 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	ZBTB1	Q9Y2K1	713 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	KDM2B	Q8NHM5	1336 aa		18.64	■□□□□ 0.57
IDH3A-222	ENST00000561279	VIRMA	Q69YN4	1812 aa	Known RBP	18.63	■□□□□ 0.57
IDH3A-222	ENST00000561279	SERPINB2	P05120	415 aa		18.63	■□□□□ 0.57
IDH3A-222	ENST00000561279	CFAP53	Q96M91	514 aa		18.63	■□□□□ 0.57
IDH3A-222	ENST00000561279	NPM2	Q86SE8	214 aa	Known RBP	18.62	■□□□□ 0.57
IDH3A-222	ENST00000561279	NMRK2	Q9NPI5	230 aa		18.62	■□□□□ 0.57
IDH3A-222	ENST00000561279	RNF181	Q9P0P0	153 aa		18.62	■□□□□ 0.57
IDH3A-222	ENST00000561279	KCP	Q6ZWJ8	1503 aa		18.62	■□□□□ 0.57
IDH3A-222	ENST00000561279	ADAMTS7	Q9UKP4	1686 aa		18.61	■□□□□ 0.57
IDH3A-222	ENST00000561279	ZNF790	Q6PG37	636 aa		18.61	■□□□□ 0.57
IDH3A-222	ENST00000561279	EIF5	P55010	431 aa	Known RBP	18.6	■□□□□ 0.57
IDH3A-222	ENST00000561279	IL17RE	Q8NFR9	667 aa		18.6	■□□□□ 0.57
IDH3A-222	ENST00000561279	NUDC	Q9Y266	331 aa		18.6	■□□□□ 0.57
IDH3A-222	ENST00000561279		H0YIN7	160 aa		18.59	■□□□□ 0.57
IDH3A-222	ENST00000561279	TTLL6	Q8N841	843 aa		18.59	■□□□□ 0.57
IDH3A-222	ENST00000561279	RBM46	Q8TBY0	533 aa	Known RBP	18.59	■□□□□ 0.57
IDH3A-222	ENST00000561279	ZNF496	Q96IT1	587 aa	Predicted RBP	18.59	■□□□□ 0.57
IDH3A-222	ENST00000561279	BCL2L12	Q9HB09	334 aa		18.59	■□□□□ 0.57
IDH3A-222	ENST00000561279	HEG1	Q9ULI3	1381 aa		18.58	■□□□□ 0.57
IDH3A-222	ENST00000561279	IFFO2	Q5TF58	517 aa		18.58	■□□□□ 0.56
IDH3A-222	ENST00000561279	FMNL2	Q96PY5	1086 aa		18.58	■□□□□ 0.56
IDH3A-222	ENST00000561279	PDZRN3	Q9UPQ7	1066 aa		18.58	■□□□□ 0.56
IDH3A-222	ENST00000561279	BICDL1	Q6ZP65	573 aa		18.57	■□□□□ 0.56
IDH3A-222	ENST00000561279	C2CD5	Q86YS7	1000 aa		18.57	■□□□□ 0.56
IDH3A-222	ENST00000561279	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	UBR2	Q8IWV8	1755 aa		18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	IL6ST	P40189	918 aa	Predicted RBP	18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	FSTL1	Q12841	308 aa		18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	COL3A1	P02461	1466 aa	Predicted RBP	18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	AFDN	P55196	1824 aa	Known RBP	18.56	■□□□□ 0.56
IDH3A-222	ENST00000561279	CEP350	Q5VT06	3117 aa		18.55	■□□□□ 0.56
IDH3A-222	ENST00000561279	BTBD11	A6QL63	1104 aa		18.55	■□□□□ 0.56
IDH3A-222	ENST00000561279	LMNB1	P20700	586 aa		18.55	■□□□□ 0.56
IDH3A-222	ENST00000561279	RRAGC	Q9HB90	399 aa		18.55	■□□□□ 0.56
IDH3A-222	ENST00000561279	PRKAR2B	P31323	418 aa		18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	PDE6B	P35913	854 aa		18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	RTF1	Q92541	710 aa	Known RBP	18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	BRIP1	Q9BX63	1249 aa		18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	TBC1D2B	Q9UPU7	963 aa		18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	NRXN2	Q9P2S2	1712 aa		18.54	■□□□□ 0.56
IDH3A-222	ENST00000561279	NPHP1	O15259	732 aa		18.53	■□□□□ 0.56
IDH3A-222	ENST00000561279	SBF1	O95248	1867 aa		18.53	■□□□□ 0.56
IDH3A-222	ENST00000561279	TBC1D9B	Q66K14	1250 aa		18.53	■□□□□ 0.56
IDH3A-222	ENST00000561279	PHACTR3	Q96KR7	559 aa		18.53	■□□□□ 0.56
IDH3A-222	ENST00000561279	CEMIP	Q8WUJ3	1361 aa		18.53	■□□□□ 0.56
IDH3A-222	ENST00000561279	A1BG	P04217	495 aa		18.52	■□□□□ 0.56
IDH3A-222	ENST00000561279	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.52	■□□□□ 0.56
IDH3A-222	ENST00000561279	SETDB2	Q96T68	719 aa		18.52	■□□□□ 0.56
IDH3A-222	ENST00000561279	RSPH6A	Q9H0K4	717 aa		18.52	■□□□□ 0.56
IDH3A-222	ENST00000561279	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.51	■□□□□ 0.55
IDH3A-222	ENST00000561279	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
IDH3A-222	ENST00000561279	RASSF7	Q02833	373 aa		18.51	■□□□□ 0.55
IDH3A-222	ENST00000561279	DNAJC5G	Q8N7S2	189 aa		18.51	■□□□□ 0.55
IDH3A-222	ENST00000561279	CARMIL3	Q8ND23	1372 aa		18.51	■□□□□ 0.55
IDH3A-222	ENST00000561279	GLTPD2	A6NH11	291 aa		18.5	■□□□□ 0.55
IDH3A-222	ENST00000561279	VEGFA	P15692	232 aa	Predicted RBP	18.5	■□□□□ 0.55
IDH3A-222	ENST00000561279	SMC1B	Q8NDV3	1235 aa		18.5	■□□□□ 0.55
IDH3A-222	ENST00000561279	DPY19L2	Q6NUT2	758 aa		18.49	■□□□□ 0.55
IDH3A-222	ENST00000561279	DZIP3	Q86Y13	1208 aa	Known RBP	18.49	■□□□□ 0.55
IDH3A-222	ENST00000561279	SIPA1L3	O60292	1781 aa	Predicted RBP	18.49	■□□□□ 0.55
IDH3A-222	ENST00000561279	DLEC1	Q9Y238	1755 aa		18.49	■□□□□ 0.55
IDH3A-222	ENST00000561279	KCNQ3	O43525	872 aa		18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	HTATSF1	O43719	755 aa	Known RBP	18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	SNRPA1	P09661	255 aa	Known RBP	18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	ST5	P78524	1137 aa		18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	PRR5L	Q6MZQ0	368 aa		18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	CNBD1	Q8NA66	436 aa		18.48	■□□□□ 0.55
IDH3A-222	ENST00000561279	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	CAMTA2	O94983	1202 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	NEFM	P07197	916 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	PPP2R1A	P30153	589 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	CLEC4G	Q6UXB4	293 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	CNKSR1	Q969H4	720 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	ZNF652	Q9Y2D9	606 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	USP16	Q9Y5T5	823 aa		18.47	■□□□□ 0.55
IDH3A-222	ENST00000561279	C21orf2	O43822	256 aa		18.46	■□□□□ 0.55
IDH3A-222	ENST00000561279	NFKBIE	O00221	500 aa		18.45	■□□□□ 0.54
IDH3A-222	ENST00000561279	SOGA3	Q5TF21	947 aa		18.45	■□□□□ 0.54
IDH3A-222	ENST00000561279	STYK1	Q6J9G0	422 aa		18.45	■□□□□ 0.54
IDH3A-222	ENST00000561279	MCM10	Q7L590	875 aa		18.45	■□□□□ 0.54
IDH3A-222	ENST00000561279	ERFE	Q4G0M1	354 aa		18.44	■□□□□ 0.54
IDH3A-222	ENST00000561279	CCDC24	Q8N4L8	307 aa		18.44	■□□□□ 0.54
IDH3A-222	ENST00000561279	KLRG1	Q96E93	195 aa		18.44	■□□□□ 0.54
IDH3A-222	ENST00000561279	MASTL	Q96GX5	879 aa		18.44	■□□□□ 0.54
IDH3A-222	ENST00000561279	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.44	■□□□□ 0.54

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