RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 HEG1Q9ULI3 1381 aa22.94■■□□□ 1.26
CDC42BPB-208ENST00000561271 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
CDC42BPB-208ENST00000561271 ZNF496Q96IT1 587 aaPredicted RBP22.94■■□□□ 1.26
CDC42BPB-208ENST00000561271 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
CDC42BPB-208ENST00000561271 CACNA1SQ13698 1873 aa22.92■■□□□ 1.26
CDC42BPB-208ENST00000561271 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
CDC42BPB-208ENST00000561271 FKBP8Q14318 412 aa22.92■■□□□ 1.26
CDC42BPB-208ENST00000561271 MCM10Q7L590 875 aa22.92■■□□□ 1.26
CDC42BPB-208ENST00000561271 ANKRD31Q8N7Z5 1873 aa22.92■■□□□ 1.26
CDC42BPB-208ENST00000561271 GRIN3BO60391 1043 aa22.9■■□□□ 1.26
CDC42BPB-208ENST00000561271 ZNF784Q8NCA9 323 aaPredicted RBP22.9■■□□□ 1.26
CDC42BPB-208ENST00000561271 PARP3Q9Y6F1 533 aa22.9■■□□□ 1.26
CDC42BPB-208ENST00000561271 BTBD11A6QL63 1104 aa22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 KCNQ3O43525 872 aa22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 DDR1Q08345 913 aa22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 DCTN1Q14203 1278 aa22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
CDC42BPB-208ENST00000561271 ZPR1O75312 459 aa22.88■■□□□ 1.25
CDC42BPB-208ENST00000561271 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
CDC42BPB-208ENST00000561271 FMNL2Q96PY5 1086 aa22.88■■□□□ 1.25
CDC42BPB-208ENST00000561271 RALBP1Q15311 655 aa22.87■■□□□ 1.25
CDC42BPB-208ENST00000561271 CCDC88AQ3V6T2 1871 aa22.86■■□□□ 1.25
CDC42BPB-208ENST00000561271 COL11A2P13942 1736 aaPredicted RBP22.86■■□□□ 1.25
CDC42BPB-208ENST00000561271 STARD3NLO95772 234 aa22.86■■□□□ 1.25
CDC42BPB-208ENST00000561271 SBF1O95248 1867 aa22.85■■□□□ 1.25
CDC42BPB-208ENST00000561271 NARFQ9UHQ1 456 aa22.85■■□□□ 1.25
CDC42BPB-208ENST00000561271 NEFMP07197 916 aa22.84■■□□□ 1.25
CDC42BPB-208ENST00000561271 PLEKHF1Q96S99 279 aa22.84■■□□□ 1.25
CDC42BPB-208ENST00000561271 NUP98P52948 1817 aa22.83■■□□□ 1.25
CDC42BPB-208ENST00000561271 A0A0G2JLW4 131 aa22.83■■□□□ 1.25
CDC42BPB-208ENST00000561271 POLRMTO00411 1230 aaKnown RBP22.83■■□□□ 1.25
CDC42BPB-208ENST00000561271 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.25
CDC42BPB-208ENST00000561271 ZNF330Q9Y3S2 320 aaPredicted RBP22.83■■□□□ 1.25
CDC42BPB-208ENST00000561271 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 EIF5P55010 431 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 TGFB2P61812 414 aa22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 TEX13AQ9BXU3 409 aaPredicted RBP22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
CDC42BPB-208ENST00000561271 PRAMEF22A3QJZ6 481 aa22.81■■□□□ 1.24
CDC42BPB-208ENST00000561271 DPEP1P16444 411 aa22.81■■□□□ 1.24
CDC42BPB-208ENST00000561271 TM4SF1P30408 202 aa22.81■■□□□ 1.24
CDC42BPB-208ENST00000561271 NFIXQ14938 502 aa22.81■■□□□ 1.24
CDC42BPB-208ENST00000561271 A1BGP04217 495 aa22.8■■□□□ 1.24
CDC42BPB-208ENST00000561271 NFE2L2Q16236 605 aa22.8■■□□□ 1.24
CDC42BPB-208ENST00000561271 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
CDC42BPB-208ENST00000561271 PIP4K2AP48426 406 aaPredicted RBP22.78■■□□□ 1.24
CDC42BPB-208ENST00000561271 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
CDC42BPB-208ENST00000561271 ATP10DQ9P241 1426 aa22.78■■□□□ 1.24
CDC42BPB-208ENST00000561271 BCS1LQ9Y276 419 aa22.78■■□□□ 1.24
CDC42BPB-208ENST00000561271 ADCY9O60503 1353 aa22.77■■□□□ 1.24
CDC42BPB-208ENST00000561271 A0A087WZG4 1122 aa22.77■■□□□ 1.24
CDC42BPB-208ENST00000561271 IL6STP40189 918 aaPredicted RBP22.77■■□□□ 1.24
CDC42BPB-208ENST00000561271 MIS18AQ9NYP9 233 aa22.77■■□□□ 1.24
CDC42BPB-208ENST00000561271 USP16Q9Y5T5 823 aa22.77■■□□□ 1.24
CDC42BPB-208ENST00000561271 CARMIL3Q8ND23 1372 aa22.76■■□□□ 1.23
CDC42BPB-208ENST00000561271 TAF7Q15545 349 aaPredicted RBP22.76■■□□□ 1.23
CDC42BPB-208ENST00000561271 TBC1D2BQ9UPU7 963 aa22.76■■□□□ 1.23
CDC42BPB-208ENST00000561271 SNRPA1P09661 255 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-208ENST00000561271 BICDL1Q6ZP65 573 aa22.75■■□□□ 1.23
CDC42BPB-208ENST00000561271 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
CDC42BPB-208ENST00000561271 KCNA3P22001 575 aa22.74■■□□□ 1.23
CDC42BPB-208ENST00000561271 CHRNA5P30532 468 aa22.74■■□□□ 1.23
CDC42BPB-208ENST00000561271 SERPINB2P05120 415 aa22.73■■□□□ 1.23
CDC42BPB-208ENST00000561271 TBC1D9BQ66K14 1250 aa22.73■■□□□ 1.23
CDC42BPB-208ENST00000561271 TIAM2Q8IVF5 1701 aa22.73■■□□□ 1.23
CDC42BPB-208ENST00000561271 ANKRD36CQ5JPF3 1778 aa22.72■■□□□ 1.23
CDC42BPB-208ENST00000561271 NPM2Q86SE8 214 aaKnown RBP22.72■■□□□ 1.23
CDC42BPB-208ENST00000561271 CAMTA2O94983 1202 aa22.71■■□□□ 1.23
CDC42BPB-208ENST00000561271 FER1L6Q2WGJ9 1857 aa22.71■■□□□ 1.23
CDC42BPB-208ENST00000561271 DICER1Q9UPY3 1922 aaKnown RBP22.7■■□□□ 1.23
CDC42BPB-208ENST00000561271 DZIP3Q86Y13 1208 aaKnown RBP22.7■■□□□ 1.22
CDC42BPB-208ENST00000561271 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
CDC42BPB-208ENST00000561271 PIM2Q9P1W9 311 aa22.7■■□□□ 1.22
CDC42BPB-208ENST00000561271 NBPF26B4DH59 902 aa22.69■■□□□ 1.22
CDC42BPB-208ENST00000561271 NBPF10Q6P3W6 841 aaKnown RBP22.69■■□□□ 1.22
CDC42BPB-208ENST00000561271 NBPF15Q8N660 670 aa22.69■■□□□ 1.22
CDC42BPB-208ENST00000561271 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
CDC42BPB-208ENST00000561271 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
CDC42BPB-208ENST00000561271 SLX4Q8IY92 1834 aa22.68■■□□□ 1.22
CDC42BPB-208ENST00000561271 RIPK4P57078 832 aa22.68■■□□□ 1.22
CDC42BPB-208ENST00000561271 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
CDC42BPB-208ENST00000561271 TNRC6CQ9HCJ0 1690 aaKnown RBP22.68■■□□□ 1.22
CDC42BPB-208ENST00000561271 TMPOP42166 694 aaKnown RBP22.67■■□□□ 1.22
CDC42BPB-208ENST00000561271 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDC42BPB-208ENST00000561271 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
CDC42BPB-208ENST00000561271 RRP7AQ9Y3A4 280 aaKnown RBP22.67■■□□□ 1.22
CDC42BPB-208ENST00000561271 GIGYF1O75420 1035 aaPredicted RBP22.66■■□□□ 1.22
CDC42BPB-208ENST00000561271 EIF4A1P60842 406 aaKnown RBP22.66■■□□□ 1.22
CDC42BPB-208ENST00000561271 ZNF526Q8TF50 670 aaPredicted RBP22.66■■□□□ 1.22
CDC42BPB-208ENST00000561271 CCDC24Q8N4L8 307 aa22.65■■□□□ 1.22
CDC42BPB-208ENST00000561271 PRR5LQ6MZQ0 368 aa22.64■■□□□ 1.21
CDC42BPB-208ENST00000561271 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
CDC42BPB-208ENST00000561271 LMOD3Q0VAK6 560 aa22.63■■□□□ 1.21
CDC42BPB-208ENST00000561271 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
CDC42BPB-208ENST00000561271 SETDB2Q96T68 719 aa22.63■■□□□ 1.21
CDC42BPB-208ENST00000561271 TSPYL4Q9UJ04 414 aa22.63■■□□□ 1.21
CDC42BPB-208ENST00000561271 NEUROD2Q15784 382 aa22.62■■□□□ 1.21
CDC42BPB-208ENST00000561271 CNBD1Q8NA66 436 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms