RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
LRRC49-227ENST00000561081 PKD1L3Q7Z443 1732 aa13.12□□□□□ -0.31
LRRC49-227ENST00000561081 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
LRRC49-227ENST00000561081 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
LRRC49-227ENST00000561081 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
LRRC49-227ENST00000561081 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
LRRC49-227ENST00000561081 POLA2Q14181 598 aa13.11□□□□□ -0.31
LRRC49-227ENST00000561081 PPP1R42Q7Z4L9 355 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 MRC1P22897 1456 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 C5P01031 1676 aa13.1□□□□□ -0.31
LRRC49-227ENST00000561081 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 MAP3K2Q9Y2U5 619 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
LRRC49-227ENST00000561081 CYP27B1O15528 508 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 SLAIN2Q9P270 581 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
LRRC49-227ENST00000561081 MX1P20591 662 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 PDIA6Q15084 440 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
LRRC49-227ENST00000561081 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRRC49-227ENST00000561081 ALDH1L1O75891 902 aa13.08□□□□□ -0.32
LRRC49-227ENST00000561081 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
LRRC49-227ENST00000561081 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
LRRC49-227ENST00000561081 SRGAP3O43295 1099 aa13.08□□□□□ -0.32
LRRC49-227ENST00000561081 RAB11FIP3O75154 756 aa13.08□□□□□ -0.32
LRRC49-227ENST00000561081 TSHZ3Q63HK5 1081 aa13.07□□□□□ -0.32
LRRC49-227ENST00000561081 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
LRRC49-227ENST00000561081 PARP4Q9UKK3 1724 aaKnown RBP13.06□□□□□ -0.32
LRRC49-227ENST00000561081 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
LRRC49-227ENST00000561081 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
LRRC49-227ENST00000561081 MTX1Q13505 466 aa13.06□□□□□ -0.32
LRRC49-227ENST00000561081 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
LRRC49-227ENST00000561081 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
LRRC49-227ENST00000561081 PRDM11Q9NQV5 511 aa13.06□□□□□ -0.32
LRRC49-227ENST00000561081 AOX1Q06278 1338 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
LRRC49-227ENST00000561081 CHMP5Q9NZZ3 219 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 ERC2O15083 957 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 DDIT3P35638 169 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
LRRC49-227ENST00000561081 LINS1Q8NG48 757 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 RHPN1Q8TCX5 695 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
LRRC49-227ENST00000561081 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
LRRC49-227ENST00000561081 REC8O95072 547 aa13.04□□□□□ -0.32
LRRC49-227ENST00000561081 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
LRRC49-227ENST00000561081 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
LRRC49-227ENST00000561081 UTYO14607 1347 aa13.04□□□□□ -0.32
LRRC49-227ENST00000561081 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
LRRC49-227ENST00000561081 RABEP1Q15276 862 aa13.04□□□□□ -0.32
LRRC49-227ENST00000561081 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
LRRC49-227ENST00000561081 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
LRRC49-227ENST00000561081 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
LRRC49-227ENST00000561081 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
LRRC49-227ENST00000561081 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
LRRC49-227ENST00000561081 CABP4P57796 275 aa13.03□□□□□ -0.32
LRRC49-227ENST00000561081 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
LRRC49-227ENST00000561081 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
LRRC49-227ENST00000561081 GRM8O00222 908 aa13.02□□□□□ -0.32
LRRC49-227ENST00000561081 MYL6BP14649 208 aa13.02□□□□□ -0.32
LRRC49-227ENST00000561081 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.32
LRRC49-227ENST00000561081 GLI3P10071 1580 aa13.02□□□□□ -0.32
LRRC49-227ENST00000561081 GSE1Q14687 1217 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
LRRC49-227ENST00000561081 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 IGKV5-2P06315 115 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
LRRC49-227ENST00000561081 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
LRRC49-227ENST00000561081 RILPL2Q969X0 211 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 ESYT1Q9BSJ8 1104 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 CHMLP26374 656 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
LRRC49-227ENST00000561081 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
LRRC49-227ENST00000561081 SUCLG2Q96I99 432 aa13□□□□□ -0.33
LRRC49-227ENST00000561081 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
LRRC49-227ENST00000561081 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
LRRC49-227ENST00000561081 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
LRRC49-227ENST00000561081 METTL22Q9BUU2 404 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-227ENST00000561081 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-227ENST00000561081 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
LRRC49-227ENST00000561081 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
LRRC49-227ENST00000561081 OS9Q13438 667 aaPredicted RBP12.99□□□□□ -0.33
LRRC49-227ENST00000561081 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms