RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 PDIA6Q15084 440 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 FNBP4Q8N3X1 1017 aaPredicted RBP21.5■■□□□ 1.03
HDDC3-206ENST00000561036 ANKRD44Q8N8A2 993 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 DNAAF4Q8WXU2 420 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 MEIS3Q99687 375 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
HDDC3-206ENST00000561036 VPS72Q15906 364 aa21.49■■□□□ 1.03
HDDC3-206ENST00000561036 KSR2Q6VAB6 950 aa21.49■■□□□ 1.03
HDDC3-206ENST00000561036 NGLY1Q96IV0 654 aa21.49■■□□□ 1.03
HDDC3-206ENST00000561036 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
HDDC3-206ENST00000561036 DDB1Q16531 1140 aa21.48■■□□□ 1.03
HDDC3-206ENST00000561036 PROSER3Q2NL68 480 aa21.48■■□□□ 1.03
HDDC3-206ENST00000561036 SRCIN1Q9C0H9 1055 aa21.48■■□□□ 1.03
HDDC3-206ENST00000561036 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
HDDC3-206ENST00000561036 ADCY9O60503 1353 aa21.48■■□□□ 1.03
HDDC3-206ENST00000561036 BCL9LQ86UU0 1499 aa21.47■■□□□ 1.03
HDDC3-206ENST00000561036 PI4KAP2A4QPH2 592 aa21.47■■□□□ 1.03
HDDC3-206ENST00000561036 GNAI2P04899 355 aa21.47■■□□□ 1.03
HDDC3-206ENST00000561036 SIRT2Q8IXJ6 389 aa21.47■■□□□ 1.03
HDDC3-206ENST00000561036 PI4KAP1Q8N8J0 262 aa21.47■■□□□ 1.03
HDDC3-206ENST00000561036 ANXA1P04083 346 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 BEND3Q5T5X7 828 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 CEP85Q6P2H3 762 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 C8orf37Q96NL8 207 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
HDDC3-206ENST00000561036 ALDH1L1O75891 902 aa21.45■■□□□ 1.02
HDDC3-206ENST00000561036 NUCB1Q02818 461 aa21.45■■□□□ 1.02
HDDC3-206ENST00000561036 PIGBQ92521 554 aa21.45■■□□□ 1.02
HDDC3-206ENST00000561036 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
HDDC3-206ENST00000561036 CCDC9Q9Y3X0 531 aaKnown RBP21.45■■□□□ 1.02
HDDC3-206ENST00000561036 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.45■■□□□ 1.02
HDDC3-206ENST00000561036 BCL9O00512 1426 aa21.45■■□□□ 1.02
HDDC3-206ENST00000561036 ITGB4P16144 1822 aa21.44■■□□□ 1.02
HDDC3-206ENST00000561036 HMMRO75330 724 aa21.44■■□□□ 1.02
HDDC3-206ENST00000561036 RGS3P49796 1198 aa21.44■■□□□ 1.02
HDDC3-206ENST00000561036 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
HDDC3-206ENST00000561036 RBM19Q9Y4C8 960 aaKnown RBP21.44■■□□□ 1.02
HDDC3-206ENST00000561036 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
HDDC3-206ENST00000561036 USP44Q9H0E7 712 aa21.43■■□□□ 1.02
HDDC3-206ENST00000561036 DCTPP1Q9H773 170 aa21.43■■□□□ 1.02
HDDC3-206ENST00000561036 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
HDDC3-206ENST00000561036 HSPA1LP34931 641 aa21.42■■□□□ 1.02
HDDC3-206ENST00000561036 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
HDDC3-206ENST00000561036 UBTFL1P0CB47 393 aaPredicted RBP21.41■■□□□ 1.02
HDDC3-206ENST00000561036 PDE4AP27815 886 aa21.41■■□□□ 1.02
HDDC3-206ENST00000561036 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
HDDC3-206ENST00000561036 XAGE3Q8WTP9 111 aa21.41■■□□□ 1.02
HDDC3-206ENST00000561036 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
HDDC3-206ENST00000561036 CHD1LQ86WJ1 897 aa21.4■■□□□ 1.02
HDDC3-206ENST00000561036 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
HDDC3-206ENST00000561036 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.01
HDDC3-206ENST00000561036 MYL6BP14649 208 aa21.39■■□□□ 1.01
HDDC3-206ENST00000561036 COPS6Q7L5N1 327 aa21.39■■□□□ 1.01
HDDC3-206ENST00000561036 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.01
HDDC3-206ENST00000561036 USP21Q9UK80 565 aa21.39■■□□□ 1.01
HDDC3-206ENST00000561036 ASAP1Q9ULH1 1129 aa21.39■■□□□ 1.01
HDDC3-206ENST00000561036 ATP8B2P98198 1209 aa21.38■■□□□ 1.01
HDDC3-206ENST00000561036 FAM161AQ3B820 660 aa21.38■■□□□ 1.01
HDDC3-206ENST00000561036 ANKRD13DQ6ZTN6 518 aa21.38■■□□□ 1.01
HDDC3-206ENST00000561036 MARCH10Q8NA82 808 aaPredicted RBP21.38■■□□□ 1.01
HDDC3-206ENST00000561036 NEXNQ0ZGT2 675 aa21.37■■□□□ 1.01
HDDC3-206ENST00000561036 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
HDDC3-206ENST00000561036 METTL22Q9BUU2 404 aaPredicted RBP21.37■■□□□ 1.01
HDDC3-206ENST00000561036 DOT1LQ8TEK3 1739 aa21.37■■□□□ 1.01
HDDC3-206ENST00000561036 UTYO14607 1347 aa21.36■■□□□ 1.01
HDDC3-206ENST00000561036 PRIM1P49642 420 aaKnown RBP21.36■■□□□ 1.01
HDDC3-206ENST00000561036 MEX3CQ5U5Q3 659 aaKnown RBP21.36■■□□□ 1.01
HDDC3-206ENST00000561036 LRRFIP2Q9Y608 721 aaKnown RBP21.36■■□□□ 1.01
HDDC3-206ENST00000561036 NBPF26B4DH59 902 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 STARD3NLO95772 234 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 NBPF14Q5TI25 921 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 ANKRD45Q5TZF3 282 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 NBPF10Q6P3W6 841 aaKnown RBP21.35■■□□□ 1.01
HDDC3-206ENST00000561036 NBPF15Q8N660 670 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
HDDC3-206ENST00000561036 FAM98CQ17RN3 349 aaKnown RBP21.34■■□□□ 1.01
HDDC3-206ENST00000561036 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
HDDC3-206ENST00000561036 ZBTB47Q9UFB7 747 aaPredicted RBP21.33■■□□□ 1.01
HDDC3-206ENST00000561036 A1BGP04217 495 aa21.32■■□□□ 1
HDDC3-206ENST00000561036 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
HDDC3-206ENST00000561036 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
HDDC3-206ENST00000561036 LNPKQ9C0E8 428 aa21.32■■□□□ 1
HDDC3-206ENST00000561036 THSD7AQ9UPZ6 1657 aa21.31■■□□□ 1
HDDC3-206ENST00000561036 GRM8O00222 908 aa21.31■■□□□ 1
HDDC3-206ENST00000561036 NBPF7P0C2Y1 421 aaPredicted RBP21.31■■□□□ 1
HDDC3-206ENST00000561036 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
HDDC3-206ENST00000561036 SSH3Q8TE77 659 aa21.31■■□□□ 1
HDDC3-206ENST00000561036 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 IGKV5-2P06315 115 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 MTX1Q13505 466 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 POLA2Q14181 598 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 C8orf34Q49A92 452 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 SMARCC1Q92922 1105 aaPredicted RBP21.3■■□□□ 1
HDDC3-206ENST00000561036 ARFGEF2Q9Y6D5 1785 aa21.3■■□□□ 1
HDDC3-206ENST00000561036 AFF2P51816 1311 aa21.29■■□□□ 1
HDDC3-206ENST00000561036 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
HDDC3-206ENST00000561036 MYD88Q99836 296 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms