RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 NCOA1Q15788 1441 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 CDC42BPAQ5VT25 1732 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 ATP9BO43861 1147 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 PDIA4P13667 645 aaKnown RBP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 ZCCHC11Q5TAX3 1644 aaKnown RBP8.2□□□□□ -1.1
HMG20A-212ENST00000560986 PLCH2O75038 1416 aa8.2□□□□□ -1.1
HMG20A-212ENST00000560986 CCDC141Q6ZP82 1450 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 MAPKBP1O60336 1514 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 ERCC6L2Q5T890 1561 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 PIK3CDO00329 1044 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 SPINT1O43278 529 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
HMG20A-212ENST00000560986 KRT76Q01546 638 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 PTSQ03393 145 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 NFATC2IPQ8NCF5 419 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
HMG20A-212ENST00000560986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMG20A-212ENST00000560986 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
HMG20A-212ENST00000560986 MYO5CQ9NQX4 1742 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 SKIP12755 728 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 SLFNL1Q499Z3 407 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
HMG20A-212ENST00000560986 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
HMG20A-212ENST00000560986 SLC10A4Q96EP9 437 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 RTEL1-TNFRSF6BF6WH68 1400 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 ABCA9Q8IUA7 1624 aa8.17□□□□□ -1.1
HMG20A-212ENST00000560986 PLXNC1O60486 1568 aa8.16□□□□□ -1.1
HMG20A-212ENST00000560986 ITGAEP38570 1179 aa8.16□□□□□ -1.1
HMG20A-212ENST00000560986 EFCAB2Q5VUJ9 269 aa8.16□□□□□ -1.1
HMG20A-212ENST00000560986 C9orf84Q5VXU9 1444 aa8.16□□□□□ -1.1
HMG20A-212ENST00000560986 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
HMG20A-212ENST00000560986 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
HMG20A-212ENST00000560986 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
HMG20A-212ENST00000560986 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
HMG20A-212ENST00000560986 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
HMG20A-212ENST00000560986 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
HMG20A-212ENST00000560986 CDC42BPBQ9Y5S2 1711 aa8.15□□□□□ -1.11
HMG20A-212ENST00000560986 TTC37Q6PGP7 1564 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 CFAP74Q9C0B2 1584 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 ARHGAP5Q13017 1502 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 ANKRD50Q9ULJ7 1429 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 SLC35F4A4IF30 521 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 USP17L5A8MUK1 530 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
HMG20A-212ENST00000560986 GSK3AP49840 483 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
HMG20A-212ENST00000560986 CDCA8Q53HL2 280 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 PLEKHM2Q8IWE5 1019 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
HMG20A-212ENST00000560986 CNTNAP3BQ96NU0 1288 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 CNTNAP3Q9BZ76 1288 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
HMG20A-212ENST00000560986 ABCC1P33527 1531 aa8.13□□□□□ -1.11
HMG20A-212ENST00000560986 RELBQ01201 579 aa8.13□□□□□ -1.11
HMG20A-212ENST00000560986 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
HMG20A-212ENST00000560986 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
HMG20A-212ENST00000560986 ERBINQ96RT1 1412 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 ATG7O95352 703 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 RNFT1Q5M7Z0 435 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 DEPDC4Q8N2C3 294 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 PLPP7Q8NBV4 271 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 COL25A1Q9BXS0 654 aaPredicted RBP8.12□□□□□ -1.11
HMG20A-212ENST00000560986 ZNF395Q9H8N7 513 aaPredicted RBP8.12□□□□□ -1.11
HMG20A-212ENST00000560986 CHIC2Q9UKJ5 165 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 ASXL2Q76L83 1435 aa8.12□□□□□ -1.11
HMG20A-212ENST00000560986 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
HMG20A-212ENST00000560986 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
HMG20A-212ENST00000560986 PDE4CQ08493 712 aa8.11□□□□□ -1.11
HMG20A-212ENST00000560986 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
HMG20A-212ENST00000560986 KDF1Q8NAX2 398 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-212ENST00000560986 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
HMG20A-212ENST00000560986 DUOX2Q9NRD8 1548 aa8.11□□□□□ -1.11
HMG20A-212ENST00000560986 KIF15Q9NS87 1388 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 ZNF644Q9H582 1327 aaPredicted RBP8.1□□□□□ -1.11
HMG20A-212ENST00000560986 SYCP2Q9BX26 1530 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
HMG20A-212ENST00000560986 LILRA1O75019 489 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
HMG20A-212ENST00000560986 NCOA4Q13772 614 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 MAP7D1Q3KQU3 841 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
HMG20A-212ENST00000560986 FANCAO15360 1455 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 NEO1Q92859 1461 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 SENP3-EIF4A1A0A087X0R7 540 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms