RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 USPL1Q5W0Q7 1092 aa13.73□□□□□ -0.21
TPM1-225ENST00000560679 AEBP1Q8IUX7 1158 aa13.73□□□□□ -0.21
TPM1-225ENST00000560679 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
TPM1-225ENST00000560679 MRC1P22897 1456 aa13.73□□□□□ -0.21
TPM1-225ENST00000560679 COL11A2P13942 1736 aaPredicted RBP13.73□□□□□ -0.21
TPM1-225ENST00000560679 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
TPM1-225ENST00000560679 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
TPM1-225ENST00000560679 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
TPM1-225ENST00000560679 NFIXQ14938 502 aa13.71□□□□□ -0.21
TPM1-225ENST00000560679 COL15A1P39059 1388 aa13.71□□□□□ -0.22
TPM1-225ENST00000560679 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
TPM1-225ENST00000560679 VIRMAQ69YN4 1812 aaKnown RBP13.7□□□□□ -0.22
TPM1-225ENST00000560679 MTHFSP49914 203 aa13.7□□□□□ -0.22
TPM1-225ENST00000560679 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
TPM1-225ENST00000560679 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
TPM1-225ENST00000560679 DNAJC10Q8IXB1 793 aa13.7□□□□□ -0.22
TPM1-225ENST00000560679 BCL2L12Q9HB09 334 aa13.7□□□□□ -0.22
TPM1-225ENST00000560679 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
TPM1-225ENST00000560679 SCN7AQ01118 1682 aa13.69□□□□□ -0.22
TPM1-225ENST00000560679 UBR2Q8IWV8 1755 aa13.68□□□□□ -0.22
TPM1-225ENST00000560679 ZPR1O75312 459 aa13.68□□□□□ -0.22
TPM1-225ENST00000560679 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
TPM1-225ENST00000560679 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
TPM1-225ENST00000560679 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
TPM1-225ENST00000560679 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
TPM1-225ENST00000560679 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
TPM1-225ENST00000560679 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
TPM1-225ENST00000560679 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
TPM1-225ENST00000560679 NARFQ9UHQ1 456 aa13.67□□□□□ -0.22
TPM1-225ENST00000560679 SERPINB2P05120 415 aa13.66□□□□□ -0.22
TPM1-225ENST00000560679 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
TPM1-225ENST00000560679 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
TPM1-225ENST00000560679 FOXN1O15353 648 aa13.65□□□□□ -0.22
TPM1-225ENST00000560679 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 SLC39A6Q13433 755 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 SLC52A2Q9HAB3 445 aa13.64□□□□□ -0.23
TPM1-225ENST00000560679 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
TPM1-225ENST00000560679 LGR6Q9HBX8 967 aa13.63□□□□□ -0.23
TPM1-225ENST00000560679 H0YIN7 160 aa13.62□□□□□ -0.23
TPM1-225ENST00000560679 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
TPM1-225ENST00000560679 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
TPM1-225ENST00000560679 LTBP3Q9NS15 1303 aa13.62□□□□□ -0.23
TPM1-225ENST00000560679 ADAMTSL1Q8N6G6 1762 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 C21orf2O43822 256 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 SLC34A2O95436 690 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 IL13P35225 146 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 ERFEQ4G0M1 354 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
TPM1-225ENST00000560679 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
TPM1-225ENST00000560679 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
TPM1-225ENST00000560679 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
TPM1-225ENST00000560679 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 SCN4AP35499 1836 aa13.6□□□□□ -0.23
TPM1-225ENST00000560679 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
TPM1-225ENST00000560679 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
TPM1-225ENST00000560679 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.231e-7■■■□□ 16.5
TPM1-225ENST00000560679 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.23
TPM1-225ENST00000560679 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
TPM1-225ENST00000560679 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.24
TPM1-225ENST00000560679 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
TPM1-225ENST00000560679 BRIP1Q9BX63 1249 aa13.58□□□□□ -0.24
TPM1-225ENST00000560679 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
TPM1-225ENST00000560679 VEGFBP49765 207 aa13.57□□□□□ -0.24
TPM1-225ENST00000560679 L3MBTL3Q96JM7 780 aaPredicted RBP13.57□□□□□ -0.24
TPM1-225ENST00000560679 PANK3Q9H999 370 aa13.57□□□□□ -0.24
TPM1-225ENST00000560679 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
TPM1-225ENST00000560679 PDE6BP35913 854 aa13.56□□□□□ -0.24
TPM1-225ENST00000560679 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
TPM1-225ENST00000560679 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
TPM1-225ENST00000560679 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
TPM1-225ENST00000560679 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
TPM1-225ENST00000560679 ITGBL1O95965 494 aaPredicted RBP13.55□□□□□ -0.24
TPM1-225ENST00000560679 TAF1DQ9H5J8 278 aaPredicted RBP13.55□□□□□ -0.24
TPM1-225ENST00000560679 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
TPM1-225ENST00000560679 PDZRN3Q9UPQ7 1066 aa13.55□□□□□ -0.24
TPM1-225ENST00000560679 MTHFSDQ2M296 383 aaKnown RBP13.54□□□□□ -0.24
TPM1-225ENST00000560679 ZNF541Q9H0D2 1346 aa13.54□□□□□ -0.24
TPM1-225ENST00000560679 A0A087WZG4 1122 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 TMEM88BA6NKF7 163 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 CAMTA2O94983 1202 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 HMOX1P09601 288 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 SRGNP10124 158 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 HSPA8P11142 646 aaKnown RBP13.53□□□□□ -0.24
TPM1-225ENST00000560679 LBX1P52954 281 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 STYK1Q6J9G0 422 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 C7orf43Q8WVR3 580 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
TPM1-225ENST00000560679 TBC1D2BQ9UPU7 963 aa13.53□□□□□ -0.24
TPM1-225ENST00000560679 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms