RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 TBC1D32Q96NH3 1257 aa7.59□□□□□ -1.19
PCAT29-204ENST00000560655 LNPKQ9C0E8 428 aa7.59□□□□□ -1.19
PCAT29-204ENST00000560655 LRRC37A3O60309 1634 aa7.59□□□□□ -1.19
PCAT29-204ENST00000560655 PHRF1Q9P1Y6 1649 aaKnown RBP7.59□□□□□ -1.19
PCAT29-204ENST00000560655 CEMIPQ8WUJ3 1361 aa7.59□□□□□ -1.2
PCAT29-204ENST00000560655 VIRMAQ69YN4 1812 aaKnown RBP7.58□□□□□ -1.2
PCAT29-204ENST00000560655 ANKRD45Q5TZF3 282 aa7.58□□□□□ -1.2
PCAT29-204ENST00000560655 RPAP2Q8IXW5 612 aaPredicted RBP7.58□□□□□ -1.2
PCAT29-204ENST00000560655 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
PCAT29-204ENST00000560655 LGR6Q9HBX8 967 aa7.58□□□□□ -1.2
PCAT29-204ENST00000560655 AXIN2Q9Y2T1 843 aa7.58□□□□□ -1.2
PCAT29-204ENST00000560655 NCOA3Q9Y6Q9 1424 aa7.58□□□□□ -1.2
PCAT29-204ENST00000560655 TRPM3Q9HCF6 1732 aaPredicted RBP7.58□□□□□ -1.2
PCAT29-204ENST00000560655 LTN1O94822 1766 aa7.57□□□□□ -1.2
PCAT29-204ENST00000560655 PLEKHO1Q53GL0 409 aaPredicted RBP7.57□□□□□ -1.2
PCAT29-204ENST00000560655 CEP85Q6P2H3 762 aa7.57□□□□□ -1.2
PCAT29-204ENST00000560655 MEIS3Q99687 375 aa7.57□□□□□ -1.2
PCAT29-204ENST00000560655 ATP10DQ9P241 1426 aa7.57□□□□□ -1.2
PCAT29-204ENST00000560655 TMEM94Q12767 1356 aa7.57□□□□□ -1.2
PCAT29-204ENST00000560655 MED1Q15648 1581 aaPredicted RBP7.56□□□□□ -1.2
PCAT29-204ENST00000560655 F6X3S4 739 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 KCNQ3O43525 872 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 CCT4P50991 539 aaKnown RBP7.56□□□□□ -1.2
PCAT29-204ENST00000560655 EIF4A1P60842 406 aaKnown RBP7.56□□□□□ -1.2
PCAT29-204ENST00000560655 BMP2KLQ5H9B9 411 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 CCDC30Q5VVM6 783 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
PCAT29-204ENST00000560655 RNMTO43148 476 aaKnown RBP7.55□□□□□ -1.2
PCAT29-204ENST00000560655 FLIIQ13045 1269 aa7.55□□□□□ -1.2
PCAT29-204ENST00000560655 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
PCAT29-204ENST00000560655 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
PCAT29-204ENST00000560655 STRCP1A6NGW2 1772 aa7.55□□□□□ -1.2
PCAT29-204ENST00000560655 DCCP43146 1447 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 RGPD2P0DJD1 1756 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 HOXB7P09629 217 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 ATF3P18847 181 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 NBR1Q14596 966 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 ZNF530Q6P9A1 599 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-204ENST00000560655 C16orf71Q8IYS4 520 aaPredicted RBP7.54□□□□□ -1.2
PCAT29-204ENST00000560655 DDX17Q92841 729 aaKnown RBP7.54□□□□□ -1.2
PCAT29-204ENST00000560655 STK31Q9BXU1 1019 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 C22orf23Q9BZE7 217 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 HEG1Q9ULI3 1381 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 KIF1AQ12756 1690 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 ALS2Q96Q42 1657 aa7.54□□□□□ -1.2
PCAT29-204ENST00000560655 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
PCAT29-204ENST00000560655 PBX2P40425 430 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 HSPA2P54652 639 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 LMOD2Q6P5Q4 547 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 MPRIPQ6WCQ1 1025 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 Q6ZNB5 142 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCAT29-204ENST00000560655 TBC1D2Q9BYX2 928 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 USP44Q9H0E7 712 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 CAMTA1Q9Y6Y1 1673 aa7.53□□□□□ -1.2
PCAT29-204ENST00000560655 LMO7Q8WWI1 1683 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 PXDNQ92626 1479 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 LMTK3Q96Q04 1460 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 GNAI2P04899 355 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 RBM25P49756 843 aaKnown RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 ZC3H6P61129 1189 aaKnown RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 SLC4A10Q6U841 1118 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 CADPS2Q86UW7 1296 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
PCAT29-204ENST00000560655 USP35Q9P2H5 1018 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 OVOS2A0A0G2JMS6 1433 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
PCAT29-204ENST00000560655 COL18A1P39060 1754 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 SMARCA5O60264 1052 aaPredicted RBP7.51□□□□□ -1.21
PCAT29-204ENST00000560655 GNAI3P08754 354 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 FKBP5Q13451 457 aaPredicted RBP7.51□□□□□ -1.21
PCAT29-204ENST00000560655 BECN1Q14457 450 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 TTC22Q5TAA0 569 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 TBC1D9Q6ZT07 1266 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 KIF2CQ99661 725 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 OSBPL3Q9H4L5 887 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 DAXXQ9UER7 740 aaPredicted RBP7.51□□□□□ -1.21
PCAT29-204ENST00000560655 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 KDM3BQ7LBC6 1761 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 NPHP3Q7Z494 1330 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 SALL3Q9BXA9 1300 aa7.51□□□□□ -1.21
PCAT29-204ENST00000560655 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
PCAT29-204ENST00000560655 PNMA6EA0A0J9YXQ4 647 aa7.5□□□□□ -1.21
PCAT29-204ENST00000560655 KDM4FA0A1W2PPD8 638 aa7.5□□□□□ -1.21
PCAT29-204ENST00000560655 HMMRO75330 724 aa7.5□□□□□ -1.21
PCAT29-204ENST00000560655 GIGYF1O75420 1035 aaPredicted RBP7.5□□□□□ -1.21
PCAT29-204ENST00000560655 EIF2S2P20042 333 aaKnown RBP7.5□□□□□ -1.21
PCAT29-204ENST00000560655 TEFQ10587 303 aa7.5□□□□□ -1.21
PCAT29-204ENST00000560655 C1orf141Q5JVX7 400 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms