RNA–Protein interactions for RNA: ENST00000560587.1

ZNF280D-215, Transcript of zinc finger protein 280D, human

TSL 1 (best)

Gene ZNF280D, Length 1,441 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF280D-215	ENST00000560587	COL15A1	P39059	1388 aa		32.76	■■■□□ 2.84
ZNF280D-215	ENST00000560587	NLGN2	Q8NFZ4	835 aa		32.76	■■■□□ 2.83
ZNF280D-215	ENST00000560587	CD2AP	Q9Y5K6	639 aa		32.76	■■■□□ 2.83
ZNF280D-215	ENST00000560587	KDM3B	Q7LBC6	1761 aa		32.74	■■■□□ 2.83
ZNF280D-215	ENST00000560587	SRP68	Q9UHB9	627 aa	Known RBP	32.74	■■■□□ 2.83
ZNF280D-215	ENST00000560587	CANX	P27824	592 aa	Known RBP	32.73	■■■□□ 2.83
ZNF280D-215	ENST00000560587	CCDC146	Q8IYE0	955 aa		32.73	■■■□□ 2.83
ZNF280D-215	ENST00000560587	PNISR	Q8TF01	805 aa	Known RBP	32.73	■■■□□ 2.83
ZNF280D-215	ENST00000560587	ZPR1	O75312	459 aa		32.72	■■■□□ 2.83
ZNF280D-215	ENST00000560587	RIPK4	P57078	832 aa		32.72	■■■□□ 2.83
ZNF280D-215	ENST00000560587	THUMPD2	Q9BTF0	503 aa	Known RBP	32.71	■■■□□ 2.83
ZNF280D-215	ENST00000560587	ADAMTS8	Q9UP79	889 aa		32.71	■■■□□ 2.83
ZNF280D-215	ENST00000560587	TMPO	P42166	694 aa	Known RBP	32.7	■■■□□ 2.83
ZNF280D-215	ENST00000560587	LMOD3	Q0VAK6	560 aa		32.7	■■■□□ 2.83
ZNF280D-215	ENST00000560587	RUNDC1	Q96C34	613 aa		32.7	■■■□□ 2.83
ZNF280D-215	ENST00000560587	SNRPA1	P09661	255 aa	Known RBP	32.69	■■■□□ 2.82
ZNF280D-215	ENST00000560587	MIS18A	Q9NYP9	233 aa		32.68	■■■□□ 2.82
ZNF280D-215	ENST00000560587	FKBP8	Q14318	412 aa		32.68	■■■□□ 2.82
ZNF280D-215	ENST00000560587	NARF	Q9UHQ1	456 aa		32.68	■■■□□ 2.82
ZNF280D-215	ENST00000560587	EIF5	P55010	431 aa	Known RBP	32.67	■■■□□ 2.82
ZNF280D-215	ENST00000560587	USPL1	Q5W0Q7	1092 aa		32.67	■■■□□ 2.82
ZNF280D-215	ENST00000560587	PARP3	Q9Y6F1	533 aa		32.67	■■■□□ 2.82
ZNF280D-215	ENST00000560587		A0A087WZG4	1122 aa		32.66	■■■□□ 2.82
ZNF280D-215	ENST00000560587	GPR162	Q16538	588 aa		32.66	■■■□□ 2.82
ZNF280D-215	ENST00000560587	RRP7A	Q9Y3A4	280 aa	Known RBP	32.66	■■■□□ 2.82
ZNF280D-215	ENST00000560587	LAMB4	A4D0S4	1761 aa		32.66	■■■□□ 2.82
ZNF280D-215	ENST00000560587	IL6ST	P40189	918 aa	Predicted RBP	32.65	■■■□□ 2.82
ZNF280D-215	ENST00000560587	KIF13B	Q9NQT8	1826 aa		32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	PRAMEF22	A3QJZ6	481 aa		32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	A1BG	P04217	495 aa		32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	PELP1	Q8IZL8	1130 aa	Known RBP	32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	USP16	Q9Y5T5	823 aa		32.64	■■■□□ 2.82
ZNF280D-215	ENST00000560587	ANP32C	O43423	234 aa		32.63	■■■□□ 2.81
ZNF280D-215	ENST00000560587	NEUROD2	Q15784	382 aa		32.63	■■■□□ 2.81
ZNF280D-215	ENST00000560587	C10orf71	Q711Q0	1435 aa		32.63	■■■□□ 2.81
ZNF280D-215	ENST00000560587	SCN7A	Q01118	1682 aa		32.63	■■■□□ 2.81
ZNF280D-215	ENST00000560587	NPM2	Q86SE8	214 aa	Known RBP	32.62	■■■□□ 2.81
ZNF280D-215	ENST00000560587	DDR1	Q08345	913 aa		32.59	■■■□□ 2.81
ZNF280D-215	ENST00000560587	EIF4A1	P60842	406 aa	Known RBP	32.58	■■■□□ 2.81
ZNF280D-215	ENST00000560587	TSPYL4	Q9UJ04	414 aa		32.58	■■■□□ 2.81
ZNF280D-215	ENST00000560587	BCL2L12	Q9HB09	334 aa		32.57	■■■□□ 2.8
ZNF280D-215	ENST00000560587	TM4SF1	P30408	202 aa		32.56	■■■□□ 2.8
ZNF280D-215	ENST00000560587	BABAM1	Q9NWV8	329 aa		32.56	■■■□□ 2.8
ZNF280D-215	ENST00000560587	UTRN	P46939	3433 aa		32.56	■■■□□ 2.8
ZNF280D-215	ENST00000560587	POLRMT	O00411	1230 aa	Known RBP	32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	GIGYF1	O75420	1035 aa	Predicted RBP	32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	YY1	P25490	414 aa		32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	PIP4K2A	P48426	406 aa	Predicted RBP	32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	CCDC184	Q52MB2	194 aa		32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	KIAA1551	Q9HCM1	1747 aa		32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	PXDNL	A1KZ92	1463 aa		32.55	■■■□□ 2.8
ZNF280D-215	ENST00000560587	NFIX	Q14938	502 aa		32.54	■■■□□ 2.8
ZNF280D-215	ENST00000560587	TRIM35	Q9UPQ4	493 aa		32.54	■■■□□ 2.8
ZNF280D-215	ENST00000560587	TBC1D2B	Q9UPU7	963 aa		32.54	■■■□□ 2.8
ZNF280D-215	ENST00000560587	BCOR	Q6W2J9	1755 aa		32.54	■■■□□ 2.8
ZNF280D-215	ENST00000560587	YBX3	P16989	372 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
ZNF280D-215	ENST00000560587	TGFB2	P61812	414 aa		32.52	■■■□□ 2.8
ZNF280D-215	ENST00000560587	CHD4	Q14839	1912 aa		32.52	■■■□□ 2.8
ZNF280D-215	ENST00000560587	GOLGB1	Q14789	3259 aa	Known RBP	32.52	■■■□□ 2.8
ZNF280D-215	ENST00000560587	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.51	■■■□□ 2.8
ZNF280D-215	ENST00000560587	GRIN3B	O60391	1043 aa		32.51	■■■□□ 2.79
ZNF280D-215	ENST00000560587	DZIP3	Q86Y13	1208 aa	Known RBP	32.51	■■■□□ 2.79
ZNF280D-215	ENST00000560587	NRXN2	Q9P2S2	1712 aa		32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	AFDN	P55196	1824 aa	Known RBP	32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	NBPF26	B4DH59	902 aa		32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	APAF1	O14727	1248 aa		32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	NBPF10	Q6P3W6	841 aa	Known RBP	32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	NBPF15	Q8N660	670 aa		32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	MRS2	Q9HD23	443 aa		32.5	■■■□□ 2.79
ZNF280D-215	ENST00000560587	CAMTA2	O94983	1202 aa		32.49	■■■□□ 2.79
ZNF280D-215	ENST00000560587	BICDL1	Q6ZP65	573 aa		32.47	■■■□□ 2.79
ZNF280D-215	ENST00000560587	WWC3	Q9ULE0	1092 aa		32.47	■■■□□ 2.79
ZNF280D-215	ENST00000560587	SERPINB2	P05120	415 aa		32.45	■■■□□ 2.79
ZNF280D-215	ENST00000560587	TBC1D9B	Q66K14	1250 aa		32.45	■■■□□ 2.79
ZNF280D-215	ENST00000560587		A0A0G2JLW4	131 aa		32.44	■■■□□ 2.78
ZNF280D-215	ENST00000560587	LAS1L	Q9Y4W2	734 aa	Known RBP	32.44	■■■□□ 2.78
ZNF280D-215	ENST00000560587	CARMIL3	Q8ND23	1372 aa		32.44	■■■□□ 2.78
ZNF280D-215	ENST00000560587	CHL1	O00533	1208 aa		32.43	■■■□□ 2.78
ZNF280D-215	ENST00000560587	DPEP1	P16444	411 aa		32.43	■■■□□ 2.78
ZNF280D-215	ENST00000560587	ZNF652	Q9Y2D9	606 aa		32.43	■■■□□ 2.78
ZNF280D-215	ENST00000560587	BRCA1	P38398	1863 aa	Known RBP	32.42	■■■□□ 2.78
ZNF280D-215	ENST00000560587	ERBB4	Q15303	1308 aa		32.42	■■■□□ 2.78
ZNF280D-215	ENST00000560587	CLEC4G	Q6UXB4	293 aa		32.4	■■■□□ 2.78
ZNF280D-215	ENST00000560587	SETDB2	Q96T68	719 aa		32.4	■■■□□ 2.78
ZNF280D-215	ENST00000560587	RGL2	O15211	777 aa		32.39	■■■□□ 2.78
ZNF280D-215	ENST00000560587	CALD1	Q05682	793 aa	Known RBP	32.39	■■■□□ 2.78
ZNF280D-215	ENST00000560587	CFAP44	Q96MT7	982 aa		32.39	■■■□□ 2.78
ZNF280D-215	ENST00000560587	MYL6B	P14649	208 aa		32.37	■■■□□ 2.77
ZNF280D-215	ENST00000560587	EIF2S2	P20042	333 aa	Known RBP	32.36	■■■□□ 2.77
ZNF280D-215	ENST00000560587	NGEF	Q8N5V2	710 aa		32.36	■■■□□ 2.77
ZNF280D-215	ENST00000560587	BCS1L	Q9Y276	419 aa		32.36	■■■□□ 2.77
ZNF280D-215	ENST00000560587	KCNA3	P22001	575 aa		32.34	■■■□□ 2.77
ZNF280D-215	ENST00000560587	CHRNA5	P30532	468 aa		32.34	■■■□□ 2.77
ZNF280D-215	ENST00000560587	PIM2	Q9P1W9	311 aa		32.34	■■■□□ 2.77
ZNF280D-215	ENST00000560587	KIF6	Q6ZMV9	814 aa		32.34	■■■□□ 2.77
ZNF280D-215	ENST00000560587	IFT57	Q9NWB7	429 aa		32.34	■■■□□ 2.77
ZNF280D-215	ENST00000560587	DLEC1	Q9Y238	1755 aa		32.33	■■■□□ 2.77
ZNF280D-215	ENST00000560587	NPHP1	O15259	732 aa		32.33	■■■□□ 2.77
ZNF280D-215	ENST00000560587	PRR5L	Q6MZQ0	368 aa		32.33	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms