RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
SMAD3-214ENST00000560402 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
SMAD3-214ENST00000560402 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
SMAD3-214ENST00000560402 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
SMAD3-214ENST00000560402 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
SMAD3-214ENST00000560402 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 TM4SF1P30408 202 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 TEFQ10587 303 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 PIM2Q9P1W9 311 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
SMAD3-214ENST00000560402 KCNA3P22001 575 aa18.19■□□□□ 0.5
SMAD3-214ENST00000560402 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
SMAD3-214ENST00000560402 STARD3NLO95772 234 aa18.18■□□□□ 0.5
SMAD3-214ENST00000560402 DALRD3Q5D0E6 543 aaKnown RBP18.18■□□□□ 0.5
SMAD3-214ENST00000560402 ARHGAP27Q6ZUM4 889 aa18.18■□□□□ 0.5
SMAD3-214ENST00000560402 SBF1O95248 1867 aa18.18■□□□□ 0.5
SMAD3-214ENST00000560402 CEP350Q5VT06 3117 aa18.18■□□□□ 0.5
SMAD3-214ENST00000560402 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
SMAD3-214ENST00000560402 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
SMAD3-214ENST00000560402 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-214ENST00000560402 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
SMAD3-214ENST00000560402 A0A087WZG4 1122 aa18.16■□□□□ 0.5
SMAD3-214ENST00000560402 KIF3CO14782 793 aa18.16■□□□□ 0.5
SMAD3-214ENST00000560402 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
SMAD3-214ENST00000560402 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
SMAD3-214ENST00000560402 HSPA6P17066 643 aa18.15■□□□□ 0.5
SMAD3-214ENST00000560402 NFIXQ14938 502 aa18.15■□□□□ 0.5
SMAD3-214ENST00000560402 EIF5P55010 431 aaKnown RBP18.14■□□□□ 0.49
SMAD3-214ENST00000560402 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
SMAD3-214ENST00000560402 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
SMAD3-214ENST00000560402 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
SMAD3-214ENST00000560402 CNGB1Q14028 1251 aaPredicted RBP18.13■□□□□ 0.49
SMAD3-214ENST00000560402 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
SMAD3-214ENST00000560402 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
SMAD3-214ENST00000560402 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
SMAD3-214ENST00000560402 ANKRD31Q8N7Z5 1873 aa18.13■□□□□ 0.49
SMAD3-214ENST00000560402 SERPINB2P05120 415 aa18.12■□□□□ 0.49
SMAD3-214ENST00000560402 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
SMAD3-214ENST00000560402 CHRNA5P30532 468 aa18.12■□□□□ 0.49
SMAD3-214ENST00000560402 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
SMAD3-214ENST00000560402 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
SMAD3-214ENST00000560402 IL6STP40189 918 aaPredicted RBP18.11■□□□□ 0.49
SMAD3-214ENST00000560402 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
SMAD3-214ENST00000560402 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
SMAD3-214ENST00000560402 COL11A2P13942 1736 aaPredicted RBP18.1■□□□□ 0.49
SMAD3-214ENST00000560402 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
SMAD3-214ENST00000560402 TOMM70O94826 608 aa18.1■□□□□ 0.49
SMAD3-214ENST00000560402 PDZRN3Q9UPQ7 1066 aa18.1■□□□□ 0.49
SMAD3-214ENST00000560402 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
SMAD3-214ENST00000560402 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
SMAD3-214ENST00000560402 PPP2R1AP30153 589 aa18.09■□□□□ 0.49
SMAD3-214ENST00000560402 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
SMAD3-214ENST00000560402 RNF181Q9P0P0 153 aa18.09■□□□□ 0.49
SMAD3-214ENST00000560402 BTBD11A6QL63 1104 aa18.08■□□□□ 0.48
SMAD3-214ENST00000560402 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
SMAD3-214ENST00000560402 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
SMAD3-214ENST00000560402 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.48
SMAD3-214ENST00000560402 PHACTR3Q96KR7 559 aa18.08■□□□□ 0.48
SMAD3-214ENST00000560402 CCDC88AQ3V6T2 1871 aa18.07■□□□□ 0.48
SMAD3-214ENST00000560402 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
SMAD3-214ENST00000560402 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
SMAD3-214ENST00000560402 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
SMAD3-214ENST00000560402 HTATSF1O43719 755 aaKnown RBP18.06■□□□□ 0.48
SMAD3-214ENST00000560402 NMRK2Q9NPI5 230 aa18.06■□□□□ 0.48
SMAD3-214ENST00000560402 DICER1Q9UPY3 1922 aaKnown RBP18.06■□□□□ 0.48
SMAD3-214ENST00000560402 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 H0YIN7 160 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 APLP1P51693 650 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 C16orf71Q8IYS4 520 aaPredicted RBP18.05■□□□□ 0.48
SMAD3-214ENST00000560402 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
SMAD3-214ENST00000560402 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
SMAD3-214ENST00000560402 CACNA1SQ13698 1873 aa18.05■□□□□ 0.48
SMAD3-214ENST00000560402 LMNB1P20700 586 aa18.04■□□□□ 0.48
SMAD3-214ENST00000560402 PDE6BP35913 854 aa18.04■□□□□ 0.48
SMAD3-214ENST00000560402 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
SMAD3-214ENST00000560402 RGL2O15211 777 aa18.03■□□□□ 0.48
SMAD3-214ENST00000560402 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
SMAD3-214ENST00000560402 NEFMP07197 916 aa18.03■□□□□ 0.48
SMAD3-214ENST00000560402 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
SMAD3-214ENST00000560402 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
SMAD3-214ENST00000560402 A1BGP04217 495 aa18.02■□□□□ 0.48
SMAD3-214ENST00000560402 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
SMAD3-214ENST00000560402 RASSF7Q02833 373 aa18.02■□□□□ 0.48
SMAD3-214ENST00000560402 PRR5LQ6MZQ0 368 aa18.02■□□□□ 0.48
SMAD3-214ENST00000560402 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.48
SMAD3-214ENST00000560402 KCNQ3O43525 872 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 ST5P78524 1137 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 FSTL1Q12841 308 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 CLEC4GQ6UXB4 293 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 MCM10Q7L590 875 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 CNBD1Q8NA66 436 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 ZNF652Q9Y2D9 606 aa18.01■□□□□ 0.47
SMAD3-214ENST00000560402 NPHP1O15259 732 aa18■□□□□ 0.47
SMAD3-214ENST00000560402 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms