RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 NLRP8Q86W28 1048 aa6.66□□□□□ -1.34
AC066612.1-201ENST00000560339 PHTF2Q8N3S3 785 aa6.66□□□□□ -1.34
AC066612.1-201ENST00000560339 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 INHAP05111 366 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 ADH6P28332 368 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 CHRNA4P43681 627 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 NBPF1Q3BBV0 1214 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 CD163Q86VB7 1156 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 DNAAF2Q9NVR5 837 aaKnown RBP6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 GJA3Q9Y6H8 435 aa6.65□□□□□ -1.34
AC066612.1-201ENST00000560339 A0A1W2PNR3 127 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 MAPTP10636 758 aaKnown RBP6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 CD33P20138 364 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 ATP4AP20648 1035 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 SCNN1DP51172 638 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 BRPF1P55201 1214 aaPredicted RBP6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 SERTAD1Q9UHV2 236 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
AC066612.1-201ENST00000560339 TATP17735 454 aaPredicted RBP6.63□□□□□ -1.35
AC066612.1-201ENST00000560339 SMTNP53814 917 aa6.63□□□□□ -1.35
AC066612.1-201ENST00000560339 TNP2Q05952 138 aa6.63□□□□□ -1.35
AC066612.1-201ENST00000560339 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
AC066612.1-201ENST00000560339 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
AC066612.1-201ENST00000560339 DOC2BQ14184 412 aa6.62□□□□□ -1.35
AC066612.1-201ENST00000560339 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
AC066612.1-201ENST00000560339 AVENQ9NQS1 362 aaPredicted RBP6.62□□□□□ -1.35
AC066612.1-201ENST00000560339 CABP1Q9NZU7 370 aa6.62□□□□□ -1.35
AC066612.1-201ENST00000560339 IRF5Q13568 498 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 MAP7D1Q3KQU3 841 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 BICDL1Q6ZP65 573 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 FCHSD1Q86WN1 690 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 SEMA6BQ9H3T3 888 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 CHIC2Q9UKJ5 165 aa6.61□□□□□ -1.35
AC066612.1-201ENST00000560339 GATA4P43694 442 aa6.6□□□□□ -1.35
AC066612.1-201ENST00000560339 PLPP7Q8NBV4 271 aa6.6□□□□□ -1.35
AC066612.1-201ENST00000560339 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
AC066612.1-201ENST00000560339 KLF15Q9UIH9 416 aa6.6□□□□□ -1.35
AC066612.1-201ENST00000560339 A6NJY4 79 aa6.59□□□□□ -1.35
AC066612.1-201ENST00000560339 SEMA3FQ13275 785 aa6.59□□□□□ -1.35
AC066612.1-201ENST00000560339 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
AC066612.1-201ENST00000560339 ZDHHC3Q9NYG2 299 aa6.59□□□□□ -1.35
AC066612.1-201ENST00000560339 MARK1Q9P0L2 795 aa6.59□□□□□ -1.35
AC066612.1-201ENST00000560339 CDK2AP1O14519 115 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 FAM157BP0CG42 384 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 SPATA31C1P0DKV0 1188 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 ALAS2P22557 587 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 ABL2P42684 1182 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 TRIM11Q96F44 468 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 GDPD2Q9HCC8 539 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 HCN2Q9UL51 889 aa6.58□□□□□ -1.36
AC066612.1-201ENST00000560339 SPDYE3A6NKU9 549 aa6.57□□□□□ -1.36
AC066612.1-201ENST00000560339 TMEM229AB2RXF0 380 aa6.57□□□□□ -1.36
AC066612.1-201ENST00000560339 SLC4A9Q96Q91 983 aa6.57□□□□□ -1.36
AC066612.1-201ENST00000560339 PARP3Q9Y6F1 533 aa6.57□□□□□ -1.36
AC066612.1-201ENST00000560339 USP3Q9Y6I4 520 aa6.57□□□□□ -1.36
AC066612.1-201ENST00000560339 BACH1O14867 736 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 MTFR1Q15390 333 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 WASHC4Q2M389 1173 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 PRRT3Q5FWE3 981 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 ZMYM1Q5SVZ6 1142 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 NEUROD4Q9HD90 331 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 IQSEC3Q9UPP2 1182 aaPredicted RBP6.56□□□□□ -1.36
AC066612.1-201ENST00000560339 ELOA3CA0A087WX78 387 aaPredicted RBP6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 ELOA3DA6NLF2 546 aaPredicted RBP6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 APBA3O96018 575 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 PSME1Q06323 249 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 LAMC2Q13753 1193 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 ELOA3BQ3SY89 546 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 SYT9Q86SS6 491 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 ELOA3Q8NG57 546 aa6.55□□□□□ -1.36
AC066612.1-201ENST00000560339 SCO2A0A1W2PP80 73 aa6.54□□□□□ -1.36
AC066612.1-201ENST00000560339 SOX11P35716 441 aa6.54□□□□□ -1.36
AC066612.1-201ENST00000560339 TXLNAP40222 546 aa6.54□□□□□ -1.36
AC066612.1-201ENST00000560339 EML3Q32P44 896 aa6.54□□□□□ -1.36
AC066612.1-201ENST00000560339 EFSO43281 561 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 ITGB7P26010 798 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 LRRC69Q6ZNQ3 347 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 L3MBTL2Q969R5 705 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 NOD1Q9Y239 953 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 PCDHGA11Q9Y5H2 935 aa6.53□□□□□ -1.36
AC066612.1-201ENST00000560339 SKIP12755 728 aa6.52□□□□□ -1.37
AC066612.1-201ENST00000560339 ZNF232Q9UNY5 417 aa6.52□□□□□ -1.37
AC066612.1-201ENST00000560339 M0R082 166 aa6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 PIK3CDO00329 1044 aa6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 SIN3BO75182 1162 aa6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 GTF2IP78347 998 aa6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 ZNF417Q8TAU3 575 aa6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 SCHIP1Q9P0W5 487 aaPredicted RBP6.51□□□□□ -1.37
AC066612.1-201ENST00000560339 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
AC066612.1-201ENST00000560339 NOS2P35228 1153 aa6.5□□□□□ -1.37
AC066612.1-201ENST00000560339 TRIM28Q13263 835 aaKnown RBP6.5□□□□□ -1.37
AC066612.1-201ENST00000560339 NEUROD1Q13562 356 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms