RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
LINC00520-206ENST00000560336 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
LINC00520-206ENST00000560336 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
LINC00520-206ENST00000560336 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
LINC00520-206ENST00000560336 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
LINC00520-206ENST00000560336 ANKRD30BQ9BXX2 1392 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 ZMYM4Q5VZL5 1548 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 RAB15P59190 212 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 A2MP01023 1474 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 RPRD2Q5VT52 1461 aaKnown RBP11.16□□□□□ -0.62
LINC00520-206ENST00000560336 MROH1Q8NDA8 1641 aa11.16□□□□□ -0.62
LINC00520-206ENST00000560336 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.62
LINC00520-206ENST00000560336 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
LINC00520-206ENST00000560336 GDPD2Q9HCC8 539 aa11.15□□□□□ -0.62
LINC00520-206ENST00000560336 KANK1Q14678 1352 aa11.15□□□□□ -0.63
LINC00520-206ENST00000560336 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.63
LINC00520-206ENST00000560336 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
LINC00520-206ENST00000560336 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
LINC00520-206ENST00000560336 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
LINC00520-206ENST00000560336 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
LINC00520-206ENST00000560336 CAMSAP1Q5T5Y3 1602 aa11.13□□□□□ -0.63
LINC00520-206ENST00000560336 VWDEQ8N2E2 1590 aa11.13□□□□□ -0.63
LINC00520-206ENST00000560336 RAPGEF3O95398 923 aa11.13□□□□□ -0.63
LINC00520-206ENST00000560336 DHX9Q08211 1270 aaKnown RBP11.13□□□□□ -0.63
LINC00520-206ENST00000560336 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
LINC00520-206ENST00000560336 ESPNB1AK53 854 aa11.12□□□□□ -0.63
LINC00520-206ENST00000560336 KIF3BO15066 747 aa11.12□□□□□ -0.63
LINC00520-206ENST00000560336 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
LINC00520-206ENST00000560336 ABL2P42684 1182 aa11.12□□□□□ -0.63
LINC00520-206ENST00000560336 IRF5Q13568 498 aa11.12□□□□□ -0.63
LINC00520-206ENST00000560336 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
LINC00520-206ENST00000560336 POLR1AO95602 1720 aaPredicted RBP11.12□□□□□ -0.63
LINC00520-206ENST00000560336 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-206ENST00000560336 SCARF1Q14162 830 aa11.11□□□□□ -0.63
LINC00520-206ENST00000560336 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
LINC00520-206ENST00000560336 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
LINC00520-206ENST00000560336 TMPRSS4Q9NRS4 437 aa11.11□□□□□ -0.63
LINC00520-206ENST00000560336 ZNF330Q9Y3S2 320 aaPredicted RBP11.11□□□□□ -0.63
LINC00520-206ENST00000560336 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
LINC00520-206ENST00000560336 CBLBQ13191 982 aa11.1□□□□□ -0.63
LINC00520-206ENST00000560336 MEIOBQ8N635 442 aa11.1□□□□□ -0.63
LINC00520-206ENST00000560336 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
LINC00520-206ENST00000560336 C6orf118Q5T5N4 469 aa11.09□□□□□ -0.63
LINC00520-206ENST00000560336 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
LINC00520-206ENST00000560336 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
LINC00520-206ENST00000560336 REREQ9P2R6 1566 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 MCCD1P59942 119 aaPredicted RBP11.08□□□□□ -0.64
LINC00520-206ENST00000560336 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 ZNF775Q96BV0 537 aaPredicted RBP11.08□□□□□ -0.64
LINC00520-206ENST00000560336 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 ARHGEF40Q8TER5 1519 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 YEATS2Q9ULM3 1422 aa11.08□□□□□ -0.64
LINC00520-206ENST00000560336 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
LINC00520-206ENST00000560336 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
LINC00520-206ENST00000560336 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
LINC00520-206ENST00000560336 ZNF784Q8NCA9 323 aaPredicted RBP11.07□□□□□ -0.64
LINC00520-206ENST00000560336 TRPM2O94759 1503 aa11.07□□□□□ -0.64
LINC00520-206ENST00000560336 LMTK2Q8IWU2 1503 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 MROH2AA6NES4 1674 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 UPP2O95045 317 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 BMP2P12643 396 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 FLIIQ13045 1269 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 Q6ZVU0 165 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 L3MBTL2Q969R5 705 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 IFT172Q9UG01 1749 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 ATP10AO60312 1499 aa11.06□□□□□ -0.64
LINC00520-206ENST00000560336 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
LINC00520-206ENST00000560336 POM121Q96HA1 1249 aa11.05□□□□□ -0.64
LINC00520-206ENST00000560336 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
LINC00520-206ENST00000560336 ABCC3O15438 1527 aa11.04□□□□□ -0.64
LINC00520-206ENST00000560336 GGT6Q6P531 493 aa11.04□□□□□ -0.64
LINC00520-206ENST00000560336 TSEN34Q9BSV6 310 aaKnown RBP11.04□□□□□ -0.64
LINC00520-206ENST00000560336 LILRA1O75019 489 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 EIF4G2P78344 907 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00520-206ENST00000560336 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 PPLO60437 1756 aa11.03□□□□□ -0.64
LINC00520-206ENST00000560336 ADD1P35611 737 aaKnown RBP11.02□□□□□ -0.65
LINC00520-206ENST00000560336 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.65
LINC00520-206ENST00000560336 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
LINC00520-206ENST00000560336 AGLP35573 1532 aa11.02□□□□□ -0.65
LINC00520-206ENST00000560336 COL17A1Q9UMD9 1497 aaPredicted RBP11.01□□□□□ -0.65
LINC00520-206ENST00000560336 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
LINC00520-206ENST00000560336 SOBPA7XYQ1 873 aa11□□□□□ -0.65
LINC00520-206ENST00000560336 RELBQ01201 579 aa11□□□□□ -0.65
LINC00520-206ENST00000560336 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
LINC00520-206ENST00000560336 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
LINC00520-206ENST00000560336 PTPRTO14522 1441 aa11□□□□□ -0.65
LINC00520-206ENST00000560336 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
LINC00520-206ENST00000560336 FER1L4A9Z1Z3 1794 aa10.99□□□□□ -0.65
LINC00520-206ENST00000560336 RAD21O60216 631 aa10.99□□□□□ -0.65
LINC00520-206ENST00000560336 CCDC125Q86Z20 511 aa10.99□□□□□ -0.65
LINC00520-206ENST00000560336 PCDHB11Q9Y5F2 797 aa10.99□□□□□ -0.65
LINC00520-206ENST00000560336 NEURL4Q96JN8 1562 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms