RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 PDIA6Q15084 440 aa18.22■□□□□ 0.51
ZEB1-218ENST00000560196 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
ZEB1-218ENST00000560196 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
ZEB1-218ENST00000560196 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
ZEB1-218ENST00000560196 IBTKQ9P2D0 1353 aaPredicted RBP18.21■□□□□ 0.51
ZEB1-218ENST00000560196 HSPA1LP34931 641 aa18.21■□□□□ 0.51
ZEB1-218ENST00000560196 DDB1Q16531 1140 aa18.21■□□□□ 0.51
ZEB1-218ENST00000560196 C8orf37Q96NL8 207 aa18.21■□□□□ 0.51
ZEB1-218ENST00000560196 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
ZEB1-218ENST00000560196 DNAAF4Q8WXU2 420 aa18.2■□□□□ 0.5
ZEB1-218ENST00000560196 BCL9O00512 1426 aa18.2■□□□□ 0.5
ZEB1-218ENST00000560196 ADCY9O60503 1353 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 GNAI3P08754 354 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 KSR2Q6VAB6 950 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
ZEB1-218ENST00000560196 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 PIGBQ92521 554 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 MEIS3Q99687 375 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
ZEB1-218ENST00000560196 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
ZEB1-218ENST00000560196 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
ZEB1-218ENST00000560196 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
ZEB1-218ENST00000560196 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
ZEB1-218ENST00000560196 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
ZEB1-218ENST00000560196 ITGB4P16144 1822 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 ANXA1P04083 346 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 BEND3Q5T5X7 828 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 SIRT2Q8IXJ6 389 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
ZEB1-218ENST00000560196 TEX13AQ9BXU3 409 aaPredicted RBP18.17■□□□□ 0.5
ZEB1-218ENST00000560196 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
ZEB1-218ENST00000560196 C1orf115Q9H7X2 142 aa18.16■□□□□ 0.5
ZEB1-218ENST00000560196 USP21Q9UK80 565 aa18.16■□□□□ 0.5
ZEB1-218ENST00000560196 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
ZEB1-218ENST00000560196 GNAI2P04899 355 aa18.15■□□□□ 0.5
ZEB1-218ENST00000560196 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
ZEB1-218ENST00000560196 MARCH10Q8NA82 808 aaPredicted RBP18.15■□□□□ 0.5
ZEB1-218ENST00000560196 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
ZEB1-218ENST00000560196 USP44Q9H0E7 712 aa18.14■□□□□ 0.49
ZEB1-218ENST00000560196 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
ZEB1-218ENST00000560196 MAP3K2Q9Y2U5 619 aa18.13■□□□□ 0.49
ZEB1-218ENST00000560196 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
ZEB1-218ENST00000560196 NUCB1Q02818 461 aa18.12■□□□□ 0.49
ZEB1-218ENST00000560196 MEX3CQ5U5Q3 659 aaKnown RBP18.12■□□□□ 0.49
ZEB1-218ENST00000560196 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
ZEB1-218ENST00000560196 XAGE3Q8WTP9 111 aa18.12■□□□□ 0.49
ZEB1-218ENST00000560196 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
ZEB1-218ENST00000560196 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
ZEB1-218ENST00000560196 HMMRO75330 724 aa18.11■□□□□ 0.49
ZEB1-218ENST00000560196 PRIM1P49642 420 aaKnown RBP18.11■□□□□ 0.49
ZEB1-218ENST00000560196 FAM98CQ17RN3 349 aaKnown RBP18.11■□□□□ 0.49
ZEB1-218ENST00000560196 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
ZEB1-218ENST00000560196 SKAP1Q86WV1 359 aa18.11■□□□□ 0.49
ZEB1-218ENST00000560196 DCTPP1Q9H773 170 aa18.11■□□□□ 0.49
ZEB1-218ENST00000560196 HDAC5Q9UQL6 1122 aa18.11■□□□□ 0.49
ZEB1-218ENST00000560196 ATRNO75882 1429 aa18.1■□□□□ 0.49
ZEB1-218ENST00000560196 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
ZEB1-218ENST00000560196 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
ZEB1-218ENST00000560196 MYL6BP14649 208 aa18.1■□□□□ 0.49
ZEB1-218ENST00000560196 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
ZEB1-218ENST00000560196 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
ZEB1-218ENST00000560196 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
ZEB1-218ENST00000560196 AFF2P51816 1311 aa18.09■□□□□ 0.49
ZEB1-218ENST00000560196 RGS3P49796 1198 aa18.09■□□□□ 0.49
ZEB1-218ENST00000560196 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
ZEB1-218ENST00000560196 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
ZEB1-218ENST00000560196 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
ZEB1-218ENST00000560196 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
ZEB1-218ENST00000560196 UTYO14607 1347 aa18.08■□□□□ 0.49
ZEB1-218ENST00000560196 STARD3NLO95772 234 aa18.08■□□□□ 0.48
ZEB1-218ENST00000560196 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
ZEB1-218ENST00000560196 PLBD2Q8NHP8 589 aa18.08■□□□□ 0.48
ZEB1-218ENST00000560196 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
ZEB1-218ENST00000560196 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
ZEB1-218ENST00000560196 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
ZEB1-218ENST00000560196 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
ZEB1-218ENST00000560196 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
ZEB1-218ENST00000560196 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
ZEB1-218ENST00000560196 A1BGP04217 495 aa18.06■□□□□ 0.48
ZEB1-218ENST00000560196 PDE4AP27815 886 aa18.06■□□□□ 0.48
ZEB1-218ENST00000560196 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
ZEB1-218ENST00000560196 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
ZEB1-218ENST00000560196 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
ZEB1-218ENST00000560196 RBM19Q9Y4C8 960 aaKnown RBP18.06■□□□□ 0.48
ZEB1-218ENST00000560196 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
ZEB1-218ENST00000560196 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
ZEB1-218ENST00000560196 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
ZEB1-218ENST00000560196 NEURL1BA8MQ27 555 aa18.04■□□□□ 0.48
ZEB1-218ENST00000560196 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
ZEB1-218ENST00000560196 MTX1Q13505 466 aa18.04■□□□□ 0.48
ZEB1-218ENST00000560196 SLC4A9Q96Q91 983 aa18.04■□□□□ 0.48
ZEB1-218ENST00000560196 GRM8O00222 908 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 NBPF7P0C2Y1 421 aaPredicted RBP18.03■□□□□ 0.48
ZEB1-218ENST00000560196 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
ZEB1-218ENST00000560196 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
ZEB1-218ENST00000560196 POLA2Q14181 598 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms