RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
RABGGTA-213ENST00000560127 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
RABGGTA-213ENST00000560127 ANKRD31Q8N7Z5 1873 aa17.72■□□□□ 0.43
RABGGTA-213ENST00000560127 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
RABGGTA-213ENST00000560127 MTHFSP49914 203 aa17.72■□□□□ 0.43
RABGGTA-213ENST00000560127 ZPR1O75312 459 aa17.71■□□□□ 0.43
RABGGTA-213ENST00000560127 NFIXQ14938 502 aa17.71■□□□□ 0.43
RABGGTA-213ENST00000560127 AMOTQ4VCS5 1084 aa17.71■□□□□ 0.43
RABGGTA-213ENST00000560127 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
RABGGTA-213ENST00000560127 NFKBIEO00221 500 aa17.7■□□□□ 0.42
RABGGTA-213ENST00000560127 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
RABGGTA-213ENST00000560127 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
RABGGTA-213ENST00000560127 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
RABGGTA-213ENST00000560127 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
RABGGTA-213ENST00000560127 C1orf141Q5JVX7 400 aa17.68■□□□□ 0.42
RABGGTA-213ENST00000560127 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
RABGGTA-213ENST00000560127 SERPINB2P05120 415 aa17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 C2CD5Q86YS7 1000 aa17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 BCL2L12Q9HB09 334 aa17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-213ENST00000560127 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
RABGGTA-213ENST00000560127 COL15A1P39059 1388 aa17.66■□□□□ 0.42
RABGGTA-213ENST00000560127 FOXN1O15353 648 aa17.65■□□□□ 0.42
RABGGTA-213ENST00000560127 CYP19A1P11511 503 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-213ENST00000560127 SLX4Q8IY92 1834 aa17.64■□□□□ 0.41
RABGGTA-213ENST00000560127 H0YIN7 160 aa17.64■□□□□ 0.41
RABGGTA-213ENST00000560127 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
RABGGTA-213ENST00000560127 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
RABGGTA-213ENST00000560127 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
RABGGTA-213ENST00000560127 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
RABGGTA-213ENST00000560127 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
RABGGTA-213ENST00000560127 SCN4AP35499 1836 aa17.63■□□□□ 0.41
RABGGTA-213ENST00000560127 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
RABGGTA-213ENST00000560127 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
RABGGTA-213ENST00000560127 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 SLC34A2O95436 690 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 SLC52A2Q9HAB3 445 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 MRC1P22897 1456 aa17.61■□□□□ 0.41
RABGGTA-213ENST00000560127 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
RABGGTA-213ENST00000560127 C21orf2O43822 256 aa17.59■□□□□ 0.41
RABGGTA-213ENST00000560127 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
RABGGTA-213ENST00000560127 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
RABGGTA-213ENST00000560127 SCN7AQ01118 1682 aa17.58■□□□□ 0.41
RABGGTA-213ENST00000560127 PASKQ96RG2 1323 aa17.58■□□□□ 0.4
RABGGTA-213ENST00000560127 DDNO94850 711 aaPredicted RBP17.58■□□□□ 0.4
RABGGTA-213ENST00000560127 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
RABGGTA-213ENST00000560127 BICDL1Q6ZP65 573 aa17.58■□□□□ 0.4
RABGGTA-213ENST00000560127 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
RABGGTA-213ENST00000560127 POLR3GLQ9BT43 218 aa17.57■□□□□ 0.4
RABGGTA-213ENST00000560127 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 IL13P35225 146 aa17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 CTCFP49711 727 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 VEGFBP49765 207 aa17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
RABGGTA-213ENST00000560127 PDE6BP35913 854 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
RABGGTA-213ENST00000560127 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
RABGGTA-213ENST00000560127 LDHDQ86WU2 507 aa17.54■□□□□ 0.4
RABGGTA-213ENST00000560127 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
RABGGTA-213ENST00000560127 PANK3Q9H999 370 aa17.53■□□□□ 0.4
RABGGTA-213ENST00000560127 WBP1LQ9NX94 342 aa17.53■□□□□ 0.4
RABGGTA-213ENST00000560127 TMEM88BA6NKF7 163 aa17.52■□□□□ 0.4
RABGGTA-213ENST00000560127 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-213ENST00000560127 LBX1P52954 281 aa17.52■□□□□ 0.4
RABGGTA-213ENST00000560127 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-213ENST00000560127 TAF1DQ9H5J8 278 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-213ENST00000560127 A0A087WZG4 1122 aa17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 IQCA1LA6NCM1 817 aa17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 TRIM26Q12899 539 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
RABGGTA-213ENST00000560127 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-213ENST00000560127 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
RABGGTA-213ENST00000560127 ABHD8Q96I13 439 aa17.5■□□□□ 0.39
RABGGTA-213ENST00000560127 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
RABGGTA-213ENST00000560127 STARD3NLO95772 234 aa17.49■□□□□ 0.39
RABGGTA-213ENST00000560127 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
RABGGTA-213ENST00000560127 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
RABGGTA-213ENST00000560127 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
RABGGTA-213ENST00000560127 SRGNP10124 158 aa17.48■□□□□ 0.39
RABGGTA-213ENST00000560127 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-213ENST00000560127 HMOX1P09601 288 aa17.47■□□□□ 0.39
RABGGTA-213ENST00000560127 MTHFSDQ2M296 383 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-213ENST00000560127 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
RABGGTA-213ENST00000560127 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
RABGGTA-213ENST00000560127 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms