RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NPHP3Q7Z494 1330 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 CPDO75976 1380 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 ABCA3Q99758 1704 aa9.95□□□□□ -0.82
SMAD3-212ENST00000559937 AFDNP55196 1824 aaKnown RBP9.94□□□□□ -0.82
SMAD3-212ENST00000559937 ADCY9O60503 1353 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 ZBTB7CA1YPR0 619 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 ERC2O15083 957 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 MTX1Q13505 466 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 BEND3Q5T5X7 828 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
SMAD3-212ENST00000559937 EXOC6BQ9Y2D4 811 aa9.94□□□□□ -0.82
SMAD3-212ENST00000559937 UBR2Q8IWV8 1755 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 PNMA6EA0A0J9YXQ4 647 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-212ENST00000559937 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-212ENST00000559937 MX1P20591 662 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 IL17RAQ96F46 866 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 CHPF2Q9P2E5 772 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 SPG7Q9UQ90 795 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 ARFGEF2Q9Y6D5 1785 aa9.93□□□□□ -0.82
SMAD3-212ENST00000559937 EIF2S2P20042 333 aaKnown RBP9.92□□□□□ -0.82
SMAD3-212ENST00000559937 XPCQ01831 940 aaPredicted RBP9.92□□□□□ -0.82
SMAD3-212ENST00000559937 RAB3GAP1Q15042 981 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 RAPGEF4Q8WZA2 1011 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 BCL11AQ9H165 835 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
SMAD3-212ENST00000559937 KDM6AO15550 1401 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-212ENST00000559937 UTYO14607 1347 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 USP42Q9H9J4 1324 aaKnown RBP9.91□□□□□ -0.82
SMAD3-212ENST00000559937 PI4KAP2A4QPH2 592 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 APBB1O00213 710 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 SOCS7O14512 581 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 KCNQ3O43525 872 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
SMAD3-212ENST00000559937 ANAPC15P60006 121 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 KSR2Q6VAB6 950 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 CLEC17AQ6ZS10 378 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 PPP1R42Q7Z4L9 355 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 PI4KAP1Q8N8J0 262 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 GBP4Q96PP9 640 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 ESYT1Q9BSJ8 1104 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 DDX21Q9NR30 783 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMAD3-212ENST00000559937 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 GLI3P10071 1580 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 MEGF6O75095 1541 aa9.91□□□□□ -0.82
SMAD3-212ENST00000559937 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
SMAD3-212ENST00000559937 ST18O60284 1047 aa9.9□□□□□ -0.82
SMAD3-212ENST00000559937 HSP90AA1P07900 732 aaKnown RBP9.9□□□□□ -0.82
SMAD3-212ENST00000559937 MCCP23508 829 aa9.9□□□□□ -0.82
SMAD3-212ENST00000559937 MCM2P49736 904 aa9.9□□□□□ -0.82
SMAD3-212ENST00000559937 L1TD1Q5T7N2 865 aaKnown RBP9.9□□□□□ -0.82
SMAD3-212ENST00000559937 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
SMAD3-212ENST00000559937 CWC22Q9HCG8 908 aaKnown RBP9.9□□□□□ -0.82
SMAD3-212ENST00000559937 NHSL1Q5SYE7 1610 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 TTC41PQ6P2S7 1318 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 CD2BP2O95400 341 aaKnown RBP9.89□□□□□ -0.83
SMAD3-212ENST00000559937 PHKG2P15735 406 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 CHMLP26374 656 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-212ENST00000559937 ERC1Q8IUD2 1116 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 IFNL2Q8IZJ0 200 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 LINS1Q8NG48 757 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 RHPN1Q8TCX5 695 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
SMAD3-212ENST00000559937 NUP188Q5SRE5 1749 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 SHANK3Q9BYB0 1731 aa9.89□□□□□ -0.83
SMAD3-212ENST00000559937 COL15A1P39059 1388 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 SRGAP3O43295 1099 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 SURF6O75683 361 aaKnown RBP9.88□□□□□ -0.83
SMAD3-212ENST00000559937 ZC3H6P61129 1189 aaKnown RBP9.88□□□□□ -0.83
SMAD3-212ENST00000559937 NUCB2P80303 420 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 DCAF5Q96JK2 942 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
SMAD3-212ENST00000559937 NLRP2Q9NX02 1062 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 MAP3K2Q9Y2U5 619 aa9.88□□□□□ -0.83
SMAD3-212ENST00000559937 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
SMAD3-212ENST00000559937 NBPF7P0C2Y1 421 aaPredicted RBP9.87□□□□□ -0.83
SMAD3-212ENST00000559937 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
SMAD3-212ENST00000559937 TNPO1Q92973 898 aaKnown RBP9.87□□□□□ -0.83
SMAD3-212ENST00000559937 TRIM6-TRIM34B2RNG4 842 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 GOLGA6L22H0YM25 854 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 GRM8O00222 908 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 TRAK2O60296 914 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 PDIA6Q15084 440 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 PI4K2BQ8TCG2 481 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 GPATCH3Q96I76 525 aa9.86□□□□□ -0.83
SMAD3-212ENST00000559937 C9orf78Q9NZ63 289 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-212ENST00000559937 GLRX3O76003 335 aaKnown RBP9.85□□□□□ -0.83
SMAD3-212ENST00000559937 ANXA1P04083 346 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 CYP2E1P05181 493 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms