RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 PROM2Q8N271 834 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 LRRC4BQ9NT99 713 aa14.87□□□□□ -0.03
TM2D3-208ENST00000559891 APBA3O96018 575 aa14.86□□□□□ -0.03
TM2D3-208ENST00000559891 PDIA6Q15084 440 aa14.86□□□□□ -0.03
TM2D3-208ENST00000559891 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
TM2D3-208ENST00000559891 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
TM2D3-208ENST00000559891 MRPL50Q8N5N7 158 aaKnown RBP14.86□□□□□ -0.03
TM2D3-208ENST00000559891 PHAXQ9H814 394 aaKnown RBP14.86□□□□□ -0.03
TM2D3-208ENST00000559891 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
TM2D3-208ENST00000559891 TJP1Q07157 1748 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 NBPF26B4DH59 902 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 NBPF14Q5TI25 921 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 NBPF10Q6P3W6 841 aaKnown RBP14.85□□□□□ -0.03
TM2D3-208ENST00000559891 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 NBPF15Q8N660 670 aa14.85□□□□□ -0.03
TM2D3-208ENST00000559891 FRAT1Q92837 279 aaPredicted RBP14.85□□□□□ -0.03
TM2D3-208ENST00000559891 MYL6BP14649 208 aa14.84□□□□□ -0.03
TM2D3-208ENST00000559891 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
TM2D3-208ENST00000559891 TNS1Q9HBL0 1735 aaKnown RBP14.84□□□□□ -0.03
TM2D3-208ENST00000559891 CYP19A1P11511 503 aaPredicted RBP14.84□□□□□ -0.03
TM2D3-208ENST00000559891 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
TM2D3-208ENST00000559891 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
TM2D3-208ENST00000559891 DEFB132Q7Z7B7 95 aa14.83□□□□□ -0.04
TM2D3-208ENST00000559891 CCNL1Q9UK58 526 aaPredicted RBP14.83□□□□□ -0.04
TM2D3-208ENST00000559891 NOB1Q9ULX3 412 aaKnown RBP14.83□□□□□ -0.04
TM2D3-208ENST00000559891 LY75O60449 1722 aa14.83□□□□□ -0.04
TM2D3-208ENST00000559891 MYH14Q7Z406 1995 aaKnown RBP14.83□□□□□ -0.04
TM2D3-208ENST00000559891 CT47B1P0C2W7 299 aaPredicted RBP14.83□□□□□ -0.04
TM2D3-208ENST00000559891 EN1Q05925 392 aaPredicted RBP14.83□□□□□ -0.04
TM2D3-208ENST00000559891 CCDC30Q5VVM6 783 aa14.83□□□□□ -0.04
TM2D3-208ENST00000559891 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
TM2D3-208ENST00000559891 HOXB7P09629 217 aa14.82□□□□□ -0.04
TM2D3-208ENST00000559891 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
TM2D3-208ENST00000559891 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
TM2D3-208ENST00000559891 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
TM2D3-208ENST00000559891 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
TM2D3-208ENST00000559891 CANXP27824 592 aaKnown RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
TM2D3-208ENST00000559891 ZNF330Q9Y3S2 320 aaPredicted RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 LAMB4A4D0S4 1761 aa14.81□□□□□ -0.04
TM2D3-208ENST00000559891 CRKLP46109 303 aaKnown RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 AIMP1Q12904 312 aaKnown RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
TM2D3-208ENST00000559891 ALDH1L2Q3SY69 923 aa14.81□□□□□ -0.04
TM2D3-208ENST00000559891 INTS5Q6P9B9 1019 aaKnown RBP14.81□□□□□ -0.04
TM2D3-208ENST00000559891 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
TM2D3-208ENST00000559891 RLBP1P12271 317 aa14.8□□□□□ -0.04
TM2D3-208ENST00000559891 RRP1P56182 461 aaKnown RBP14.8□□□□□ -0.04
TM2D3-208ENST00000559891 ZNF428Q96B54 188 aa14.8□□□□□ -0.04
TM2D3-208ENST00000559891 STK31Q9BXU1 1019 aa14.8□□□□□ -0.04
TM2D3-208ENST00000559891 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
TM2D3-208ENST00000559891 F6X3S4 739 aa14.79□□□□□ -0.04
TM2D3-208ENST00000559891 DDX21Q9NR30 783 aaKnown RBP eCLIP14.79□□□□□ -0.04
TM2D3-208ENST00000559891 COL5A3P25940 1745 aaPredicted RBP14.79□□□□□ -0.04
TM2D3-208ENST00000559891 PLSCR1O15162 318 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 TAF1LQ8IZX4 1826 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 STARD3NLO95772 234 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 TRIM27P14373 513 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 FLIIQ13045 1269 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 PANK1Q8TE04 598 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 XAGE3Q8WTP9 111 aa14.78□□□□□ -0.04
TM2D3-208ENST00000559891 SOS1Q07889 1333 aaPredicted RBP14.77□□□□□ -0.04
TM2D3-208ENST00000559891 COPS6Q7L5N1 327 aa14.77□□□□□ -0.04
TM2D3-208ENST00000559891 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.04
TM2D3-208ENST00000559891 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.05
TM2D3-208ENST00000559891 CCDC87Q9NVE4 849 aa14.77□□□□□ -0.05
TM2D3-208ENST00000559891 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
TM2D3-208ENST00000559891 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
TM2D3-208ENST00000559891 ARXQ96QS3 562 aa14.75□□□□□ -0.05
TM2D3-208ENST00000559891 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
TM2D3-208ENST00000559891 UPF1Q92900 1129 aaKnown RBP eCLIP14.75□□□□□ -0.05
TM2D3-208ENST00000559891 TBC1D2BQ9UPU7 963 aa14.75□□□□□ -0.05
TM2D3-208ENST00000559891 CICQ96RK0 1608 aaPredicted RBP14.74□□□□□ -0.05
TM2D3-208ENST00000559891 ZNF831Q5JPB2 1677 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 PI4KAP2A4QPH2 592 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 GNPATO15228 680 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 ATF7IPQ6VMQ6 1270 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 PI4KAP1Q8N8J0 262 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 HYPKQ9NX55 129 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 ADCY9O60503 1353 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 PHF14O94880 888 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
TM2D3-208ENST00000559891 EIF5P55010 431 aaKnown RBP14.73□□□□□ -0.05
TM2D3-208ENST00000559891 SLC27A3Q5K4L6 730 aa14.73□□□□□ -0.05
TM2D3-208ENST00000559891 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
TM2D3-208ENST00000559891 KIF16BQ96L93 1317 aa14.73□□□□□ -0.05
TM2D3-208ENST00000559891 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
TM2D3-208ENST00000559891 SLC4A10Q6U841 1118 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 COG6Q9Y2V7 657 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 CACNA1FO60840 1977 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 CNTNAP4Q9C0A0 1308 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 HLFQ16534 295 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 TMEM57Q8N5G2 664 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
TM2D3-208ENST00000559891 RREB1Q92766 1687 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms