RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
IDH3A-217ENST00000559889 SIPA1L3O60292 1781 aaPredicted RBP12.08□□□□□ -0.48
IDH3A-217ENST00000559889 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.48
IDH3A-217ENST00000559889 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
IDH3A-217ENST00000559889 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
IDH3A-217ENST00000559889 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
IDH3A-217ENST00000559889 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
IDH3A-217ENST00000559889 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
IDH3A-217ENST00000559889 DDR1Q08345 913 aa12.06□□□□□ -0.48
IDH3A-217ENST00000559889 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
IDH3A-217ENST00000559889 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
IDH3A-217ENST00000559889 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
IDH3A-217ENST00000559889 KCNQ3O43525 872 aa12.06□□□□□ -0.48
IDH3A-217ENST00000559889 TM4SF1P30408 202 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 TGFB2P61812 414 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 MCM10Q7L590 875 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 PARP3Q9Y6F1 533 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 COL15A1P39059 1388 aa12.05□□□□□ -0.48
IDH3A-217ENST00000559889 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
IDH3A-217ENST00000559889 ZPR1O75312 459 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 STARD3NLO95772 234 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 KCNA3P22001 575 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
IDH3A-217ENST00000559889 DCTN1Q14203 1278 aa12.04□□□□□ -0.48
IDH3A-217ENST00000559889 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
IDH3A-217ENST00000559889 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
IDH3A-217ENST00000559889 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
IDH3A-217ENST00000559889 DPEP1P16444 411 aa12.03□□□□□ -0.48
IDH3A-217ENST00000559889 NFIXQ14938 502 aa12.02□□□□□ -0.48
IDH3A-217ENST00000559889 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.48
IDH3A-217ENST00000559889 TEX13AQ9BXU3 409 aaPredicted RBP12.02□□□□□ -0.48
IDH3A-217ENST00000559889 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
IDH3A-217ENST00000559889 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
IDH3A-217ENST00000559889 ADCY9O60503 1353 aa12.01□□□□□ -0.49
IDH3A-217ENST00000559889 A1BGP04217 495 aa12.01□□□□□ -0.49
IDH3A-217ENST00000559889 RALBP1Q15311 655 aa12.01□□□□□ -0.49
IDH3A-217ENST00000559889 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
IDH3A-217ENST00000559889 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
IDH3A-217ENST00000559889 BCS1LQ9Y276 419 aa12□□□□□ -0.49
IDH3A-217ENST00000559889 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
IDH3A-217ENST00000559889 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
IDH3A-217ENST00000559889 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
IDH3A-217ENST00000559889 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
IDH3A-217ENST00000559889 NRXN2Q9P2S2 1712 aa11.99□□□□□ -0.49
IDH3A-217ENST00000559889 A0A087WZG4 1122 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 CHRNA5P30532 468 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 MIS18AQ9NYP9 233 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 CEP350Q5VT06 3117 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 SERPINB2P05120 415 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
IDH3A-217ENST00000559889 PIP4K2AP48426 406 aaPredicted RBP11.98□□□□□ -0.49
IDH3A-217ENST00000559889 TBC1D9BQ66K14 1250 aa11.98□□□□□ -0.49
IDH3A-217ENST00000559889 SUPT16HQ9Y5B9 1047 aaKnown RBP11.98□□□□□ -0.49
IDH3A-217ENST00000559889 CAMTA2O94983 1202 aa11.97□□□□□ -0.49
IDH3A-217ENST00000559889 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
IDH3A-217ENST00000559889 PIM2Q9P1W9 311 aa11.97□□□□□ -0.49
IDH3A-217ENST00000559889 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
IDH3A-217ENST00000559889 SCN7AQ01118 1682 aa11.97□□□□□ -0.49
IDH3A-217ENST00000559889 AFDNP55196 1824 aaKnown RBP11.97□□□□□ -0.49
IDH3A-217ENST00000559889 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
IDH3A-217ENST00000559889 NEFMP07197 916 aa11.96□□□□□ -0.49
IDH3A-217ENST00000559889 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
IDH3A-217ENST00000559889 MYBBP1AQ9BQG0 1328 aaKnown RBP11.96□□□□□ -0.49
IDH3A-217ENST00000559889 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.49
IDH3A-217ENST00000559889 NBPF26B4DH59 902 aa11.96□□□□□ -0.5
IDH3A-217ENST00000559889 C1QTNF8P60827 252 aa11.96□□□□□ -0.5
IDH3A-217ENST00000559889 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.5
IDH3A-217ENST00000559889 NBPF15Q8N660 670 aa11.96□□□□□ -0.5
IDH3A-217ENST00000559889 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
IDH3A-217ENST00000559889 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
IDH3A-217ENST00000559889 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
IDH3A-217ENST00000559889 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
IDH3A-217ENST00000559889 GIGYF1O75420 1035 aaPredicted RBP11.95□□□□□ -0.5
IDH3A-217ENST00000559889 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
IDH3A-217ENST00000559889 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
IDH3A-217ENST00000559889 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
IDH3A-217ENST00000559889 NEFLP07196 543 aa11.94□□□□□ -0.5
IDH3A-217ENST00000559889 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
IDH3A-217ENST00000559889 KDM3BQ7LBC6 1761 aa11.93□□□□□ -0.5
IDH3A-217ENST00000559889 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
IDH3A-217ENST00000559889 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
IDH3A-217ENST00000559889 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
IDH3A-217ENST00000559889 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
IDH3A-217ENST00000559889 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
IDH3A-217ENST00000559889 RIPK4P57078 832 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 NPM2Q86SE8 214 aaKnown RBP11.92□□□□□ -0.5
IDH3A-217ENST00000559889 CCDC24Q8N4L8 307 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
IDH3A-217ENST00000559889 DLEC1Q9Y238 1755 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms