RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
TRIP4-208ENST00000559833 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
TRIP4-208ENST00000559833 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
TRIP4-208ENST00000559833 CYP27B1O15528 508 aa12.15□□□□□ -0.46
TRIP4-208ENST00000559833 SLC34A2O95436 690 aa12.15□□□□□ -0.46
TRIP4-208ENST00000559833 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
TRIP4-208ENST00000559833 PBX2P40425 430 aa12.15□□□□□ -0.46
TRIP4-208ENST00000559833 SLC16A10Q8TF71 515 aa12.15□□□□□ -0.46
TRIP4-208ENST00000559833 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.46
TRIP4-208ENST00000559833 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
TRIP4-208ENST00000559833 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
TRIP4-208ENST00000559833 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
TRIP4-208ENST00000559833 POLKQ9UBT6 870 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
TRIP4-208ENST00000559833 KCNQ4P56696 695 aa12.13□□□□□ -0.47
TRIP4-208ENST00000559833 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
TRIP4-208ENST00000559833 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
TRIP4-208ENST00000559833 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
TRIP4-208ENST00000559833 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
TRIP4-208ENST00000559833 STK25O00506 426 aa12.12□□□□□ -0.47
TRIP4-208ENST00000559833 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIP4-208ENST00000559833 ARXQ96QS3 562 aa12.12□□□□□ -0.47
TRIP4-208ENST00000559833 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
TRIP4-208ENST00000559833 HSPA5P11021 654 aaKnown RBP12.11□□□□□ -0.47
TRIP4-208ENST00000559833 EYA1Q99502 592 aa12.11□□□□□ -0.47
TRIP4-208ENST00000559833 ITGB4P16144 1822 aa12.11□□□□□ -0.47
TRIP4-208ENST00000559833 YY1P25490 414 aa12.1□□□□□ -0.47
TRIP4-208ENST00000559833 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
TRIP4-208ENST00000559833 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
TRIP4-208ENST00000559833 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
TRIP4-208ENST00000559833 PANK3Q9H999 370 aa12.09□□□□□ -0.47
TRIP4-208ENST00000559833 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
TRIP4-208ENST00000559833 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
TRIP4-208ENST00000559833 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
TRIP4-208ENST00000559833 PIGBQ92521 554 aa12.08□□□□□ -0.48
TRIP4-208ENST00000559833 C5P01031 1676 aa12.07□□□□□ -0.48
TRIP4-208ENST00000559833 PPM1GO15355 546 aaPredicted RBP12.07□□□□□ -0.48
TRIP4-208ENST00000559833 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
TRIP4-208ENST00000559833 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
TRIP4-208ENST00000559833 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
TRIP4-208ENST00000559833 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
TRIP4-208ENST00000559833 PHKG2P15735 406 aa12.06□□□□□ -0.48
TRIP4-208ENST00000559833 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
TRIP4-208ENST00000559833 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
TRIP4-208ENST00000559833 POLD1P28340 1107 aa12.05□□□□□ -0.48
TRIP4-208ENST00000559833 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
TRIP4-208ENST00000559833 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
TRIP4-208ENST00000559833 C4BP0C0L5 1744 aa12.04□□□□□ -0.48
TRIP4-208ENST00000559833 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
TRIP4-208ENST00000559833 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
TRIP4-208ENST00000559833 CHD4Q14839 1912 aa12.03□□□□□ -0.48
TRIP4-208ENST00000559833 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
TRIP4-208ENST00000559833 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
TRIP4-208ENST00000559833 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
TRIP4-208ENST00000559833 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
TRIP4-208ENST00000559833 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
TRIP4-208ENST00000559833 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
TRIP4-208ENST00000559833 PPP1R37O75864 691 aa12.02□□□□□ -0.49
TRIP4-208ENST00000559833 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
TRIP4-208ENST00000559833 ASAP1Q9ULH1 1129 aa12.02□□□□□ -0.49
TRIP4-208ENST00000559833 ZNF831Q5JPB2 1677 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 ERVV-2B6SEH9 535 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
TRIP4-208ENST00000559833 SIK1P57059 783 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
TRIP4-208ENST00000559833 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 NLGN2Q8NFZ4 835 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 TMOD3Q9NYL9 352 aa12.01□□□□□ -0.49
TRIP4-208ENST00000559833 ARHGAP33O14559 1287 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 RGL2O15211 777 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 ITPK1Q13572 414 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 MORC1Q86VD1 984 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 ZNF784Q8NCA9 323 aaPredicted RBP12□□□□□ -0.49
TRIP4-208ENST00000559833 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 KDRP35968 1356 aa12□□□□□ -0.49
TRIP4-208ENST00000559833 SSFA2P28290 1259 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 IL13P35225 146 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
TRIP4-208ENST00000559833 DCAF5Q96JK2 942 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 PLA2G2EQ9NZK7 142 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 CD2APQ9Y5K6 639 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
TRIP4-208ENST00000559833 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
TRIP4-208ENST00000559833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
TRIP4-208ENST00000559833 GPR162Q16538 588 aa11.98□□□□□ -0.49
TRIP4-208ENST00000559833 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
TRIP4-208ENST00000559833 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
TRIP4-208ENST00000559833 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
TRIP4-208ENST00000559833 KNSTRNQ9Y448 316 aa11.98□□□□□ -0.49
TRIP4-208ENST00000559833 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
TRIP4-208ENST00000559833 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIP4-208ENST00000559833 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
TRIP4-208ENST00000559833 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms