RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 ZNHIT6Q9NWK9 470 aaKnown RBP23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 MINDY4BA8MYZ0 360 aa23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 SERPINC1P01008 464 aa23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 CDR1P51861 262 aa23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 TTF1Q15361 905 aaPredicted RBP23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 BRPF1P55201 1214 aaPredicted RBP23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 EVI5LQ96CN4 794 aa23.07■■□□□ 1.28
IGDCC4-204ENST00000559327 ZNF76P36508 570 aa23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 ZHX3Q9H4I2 956 aa23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 RNF41Q9H4P4 317 aaPredicted RBP23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 SEC63Q9UGP8 760 aaKnown RBP23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 CAGE1Q8TC20 777 aa23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 RDXP35241 583 aaKnown RBP23.06■■□□□ 1.28
IGDCC4-204ENST00000559327 HSP90AA2PQ14568 343 aaPredicted RBP23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 ARHGAP45Q92619 1136 aa23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 SH2B1Q9NRF2 756 aaPredicted RBP23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 ECHDC1Q9NTX5 307 aa23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
IGDCC4-204ENST00000559327 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
IGDCC4-204ENST00000559327 ZNF213O14771 459 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 ZMYM3Q14202 1370 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 PLEKHH1Q9ULM0 1364 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 TEX35Q5T0J7 233 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 TRPM2O94759 1503 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 CBFA2T2O43439 604 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 ANKRD13DQ6ZTN6 518 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 CEP57L1Q8IYX8 460 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
IGDCC4-204ENST00000559327 ABCC1P33527 1531 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 FLT4P35916 1363 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 LUC7LQ9NQ29 371 aaKnown RBP23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 RFC4P35249 363 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 UBE3BQ7Z3V4 1068 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 PPFIBP1Q86W92 1011 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 DDX11Q96FC9 970 aa23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 CTCFLQ8NI51 663 aaPredicted RBP23.02■■□□□ 1.28
IGDCC4-204ENST00000559327 ATP5J2-PTCD1G3V325 749 aa23.01■■□□□ 1.27
IGDCC4-204ENST00000559327 MYO6Q9UM54 1294 aa23.01■■□□□ 1.27
IGDCC4-204ENST00000559327 NUP62CLQ9H1M0 184 aa23.01■■□□□ 1.27
IGDCC4-204ENST00000559327 NPATQ14207 1427 aa23.01■■□□□ 1.27
IGDCC4-204ENST00000559327 TXLNBQ8N3L3 684 aa23.01■■□□□ 1.27
IGDCC4-204ENST00000559327 UBAP1LF5GYI3 381 aa23■■□□□ 1.27
IGDCC4-204ENST00000559327 CCDC83Q8IWF9 413 aa23■■□□□ 1.27
IGDCC4-204ENST00000559327 LDHCP07864 332 aa23■■□□□ 1.27
IGDCC4-204ENST00000559327 PIBF1Q8WXW3 757 aa23■■□□□ 1.27
IGDCC4-204ENST00000559327 SMARCC1Q92922 1105 aaPredicted RBP23■■□□□ 1.27
IGDCC4-204ENST00000559327 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
IGDCC4-204ENST00000559327 SSBP05455 408 aaKnown RBP eCLIP22.99■■□□□ 1.27
IGDCC4-204ENST00000559327 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
IGDCC4-204ENST00000559327 TANGO6Q9C0B7 1094 aa22.99■■□□□ 1.27
IGDCC4-204ENST00000559327 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
IGDCC4-204ENST00000559327 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
IGDCC4-204ENST00000559327 ST5P78524 1137 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 C6orf229H3BNL8 230 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 FBLN1P23142 703 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 CCDC152Q4G0S7 254 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 SLC12A7Q9Y666 1083 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 ARHGEF12Q9NZN5 1544 aa22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 RANBP6O60518 1105 aaKnown RBP22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 SPTY2D1Q68D10 685 aaPredicted RBP22.98■■□□□ 1.27
IGDCC4-204ENST00000559327 UPF3BQ9BZI7 483 aaKnown RBP22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 TNIP1Q15025 636 aa22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 UQCRFS1P1P0C7P4 283 aa22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
IGDCC4-204ENST00000559327 SETQ01105 290 aaPredicted RBP22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 HSP90B2PQ58FF3 399 aa22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 PDCL3Q9H2J4 239 aa22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 ERCC4Q92889 916 aaPredicted RBP22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 ALDH1L1O75891 902 aa22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
IGDCC4-204ENST00000559327 GOLIM4O00461 696 aa22.95■■□□□ 1.27
IGDCC4-204ENST00000559327 TBX22Q9Y458 520 aa22.95■■□□□ 1.27
IGDCC4-204ENST00000559327 BMP2KLQ5H9B9 411 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 SMTNL1A8MU46 457 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 IL2RBP14784 551 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 NBPF6Q5VWK0 638 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 NBPF5PQ86XG9 351 aaPredicted RBP22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 NBPF4Q96M43 638 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 BCL11BQ9C0K0 894 aaPredicted RBP22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 BAG3O95817 575 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 DEF6Q9H4E7 631 aa22.95■■□□□ 1.26
IGDCC4-204ENST00000559327 C8orf76Q96K31 380 aa22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 MCM4P33991 863 aa22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 DDB1Q16531 1140 aa22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 ATP10AO60312 1499 aa22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 YTHDC2Q9H6S0 1430 aaKnown RBP22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 DNMT1P26358 1616 aaKnown RBP22.94■■□□□ 1.26
IGDCC4-204ENST00000559327 ATP6V1AP38606 617 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms