RNA–Protein interactions for RNA: ENST00000559304.5

KNSTRN-206, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-206ENST00000559304 MEGF6O75095 1541 aa13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 MAP1SQ66K74 1059 aaPredicted RBP13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 MPRIPQ6WCQ1 1025 aa13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
KNSTRN-206ENST00000559304 GYS1P13807 737 aa13.75□□□□□ -0.21
KNSTRN-206ENST00000559304 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
KNSTRN-206ENST00000559304 DDX21Q9NR30 783 aaKnown RBP eCLIP13.75□□□□□ -0.21
KNSTRN-206ENST00000559304 SCN4AP35499 1836 aa13.74□□□□□ -0.21
KNSTRN-206ENST00000559304 TRAPPC3LQ5T215 181 aa13.74□□□□□ -0.21
KNSTRN-206ENST00000559304 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
KNSTRN-206ENST00000559304 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 SIK1P57059 783 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 CIAPIN1Q6FI81 312 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 HPS5Q9UPZ3 1129 aa13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-206ENST00000559304 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 LTN1O94822 1766 aa13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 RTCBQ9Y3I0 505 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-206ENST00000559304 MAP2P11137 1827 aaKnown RBP13.7□□□□□ -0.22
KNSTRN-206ENST00000559304 ITPK1Q13572 414 aa13.7□□□□□ -0.22
KNSTRN-206ENST00000559304 TLL2Q9Y6L7 1015 aa13.7□□□□□ -0.22
KNSTRN-206ENST00000559304 RFC4P35249 363 aa13.69□□□□□ -0.22
KNSTRN-206ENST00000559304 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
KNSTRN-206ENST00000559304 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
KNSTRN-206ENST00000559304 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
KNSTRN-206ENST00000559304 EPHX2P34913 555 aa13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 DDR1Q08345 913 aa13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 LTV1Q96GA3 475 aaPredicted RBP13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
KNSTRN-206ENST00000559304 ATP6V1AP38606 617 aa13.67□□□□□ -0.22
KNSTRN-206ENST00000559304 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
KNSTRN-206ENST00000559304 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
KNSTRN-206ENST00000559304 TTC21AQ8NDW8 1320 aa13.66□□□□□ -0.22
KNSTRN-206ENST00000559304 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
KNSTRN-206ENST00000559304 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
KNSTRN-206ENST00000559304 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
KNSTRN-206ENST00000559304 CST9Q5W186 159 aa13.65□□□□□ -0.22
KNSTRN-206ENST00000559304 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
KNSTRN-206ENST00000559304 ITGB4P16144 1822 aa13.64□□□□□ -0.23
KNSTRN-206ENST00000559304 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
KNSTRN-206ENST00000559304 PIGBQ92521 554 aa13.64□□□□□ -0.23
KNSTRN-206ENST00000559304 COL25A1Q9BXS0 654 aaPredicted RBP13.63□□□□□ -0.23
KNSTRN-206ENST00000559304 TRPM7Q96QT4 1865 aa13.62□□□□□ -0.23
KNSTRN-206ENST00000559304 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
KNSTRN-206ENST00000559304 FKBP8Q14318 412 aa13.62□□□□□ -0.23
KNSTRN-206ENST00000559304 TAOK3Q9H2K8 898 aa13.62□□□□□ -0.23
KNSTRN-206ENST00000559304 POLRMTO00411 1230 aaKnown RBP13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 PCDH11XQ9BZA7 1347 aa13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 PCDH11YQ9BZA8 1340 aa13.61□□□□□ -0.23
KNSTRN-206ENST00000559304 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 UNC80Q8N2C7 3258 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 TRAF5O00463 557 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 C21orf2O43822 256 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 SAGE1Q9NXZ1 904 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
KNSTRN-206ENST00000559304 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 NOGQ13253 232 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 AKAP4Q5JQC9 854 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 KDM2AQ9Y2K7 1162 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 ZNF541Q9H0D2 1346 aa13.59□□□□□ -0.23
KNSTRN-206ENST00000559304 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 IP6K1Q92551 441 aa13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 HHIPL1Q96JK4 782 aa13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.24
KNSTRN-206ENST00000559304 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
KNSTRN-206ENST00000559304 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
KNSTRN-206ENST00000559304 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 RPS6KA4O75676 772 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 TRPA1O75762 1119 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 PRDM6Q9NQX0 595 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 USP42Q9H9J4 1324 aaKnown RBP13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 INSRP06213 1382 aa13.56□□□□□ -0.24
KNSTRN-206ENST00000559304 H0YIN7 160 aa13.55□□□□□ -0.24
KNSTRN-206ENST00000559304 CELF2O95319 508 aaKnown RBP13.55□□□□□ -0.24
KNSTRN-206ENST00000559304 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
KNSTRN-206ENST00000559304 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
KNSTRN-206ENST00000559304 BICDL1Q6ZP65 573 aa13.55□□□□□ -0.24
KNSTRN-206ENST00000559304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms