RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 DKK1O94907 266 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 SH3BP2P78314 561 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 FKBP4Q02790 459 aaKnown RBP eCLIP3.63□□□□□ -1.83
GABPB1-209ENST00000559100 FKBP5Q13451 457 aaPredicted RBP3.63□□□□□ -1.83
GABPB1-209ENST00000559100 FZD5Q13467 585 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 PLA2G2CQ5R387 149 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 ZMYM1Q5SVZ6 1142 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 EHBP1Q8NDI1 1231 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 SCG3Q8WXD2 468 aaKnown RBP3.63□□□□□ -1.83
GABPB1-209ENST00000559100 PURBQ96QR8 312 aaKnown RBP3.63□□□□□ -1.83
GABPB1-209ENST00000559100 ZNF358Q9NW07 568 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 KIAA1522Q9P206 1035 aaPredicted RBP3.63□□□□□ -1.83
GABPB1-209ENST00000559100 SERTAD1Q9UHV2 236 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 DCTN4Q9UJW0 460 aa3.63□□□□□ -1.83
GABPB1-209ENST00000559100 ERVH48-1M5A8F1 160 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 BACH1O14867 736 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 FAM13AO94988 1023 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 WEE1P30291 646 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 SCTRP47872 440 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 ZNF385CQ66K41 422 aaPredicted RBP3.62□□□□□ -1.83
GABPB1-209ENST00000559100 CC2D2BQ6DHV5 1058 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 CAPN12Q6ZSI9 719 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 NPAS4Q8IUM7 802 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 TRMT44Q8IYL2 757 aaKnown RBP3.62□□□□□ -1.83
GABPB1-209ENST00000559100 TNS4Q8IZW8 715 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 CYLDQ9NQC7 956 aa3.62□□□□□ -1.83
GABPB1-209ENST00000559100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.62□□□□□ -1.83
GABPB1-209ENST00000559100 SCO2A0A1W2PP80 73 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 M0R2N6 131 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 NDUFB5O43674 189 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 PPP1R12BO60237 982 aaPredicted RBP3.61□□□□□ -1.83
GABPB1-209ENST00000559100 TCF3P15923 654 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 SMPD1P17405 629 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 IGFBP4P22692 258 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 FSHRP23945 695 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 VARSP26640 1264 aaKnown RBP3.61□□□□□ -1.83
GABPB1-209ENST00000559100 GDF10P55107 478 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 TRIM32Q13049 653 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 TSNAXIP1Q2TAA8 658 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 EAPPQ56P03 285 aaPredicted RBP3.61□□□□□ -1.83
GABPB1-209ENST00000559100 NOM1Q5C9Z4 860 aaKnown RBP3.61□□□□□ -1.83
GABPB1-209ENST00000559100 INTS6LQ5JSJ4 861 aaKnown RBP3.61□□□□□ -1.83
GABPB1-209ENST00000559100 HELQQ8TDG4 1101 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 ASB16Q96NS5 453 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 C1QTNF2Q9BXJ5 285 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 CHMP3Q9Y3E7 222 aa3.61□□□□□ -1.83
GABPB1-209ENST00000559100 LOC105371045A0A1W2PR82 267 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 FOXO3O43524 673 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 STAU1O95793 577 aaKnown RBP3.6□□□□□ -1.83
GABPB1-209ENST00000559100 ARHGAP4P98171 946 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 DHX9Q08211 1270 aaKnown RBP3.6□□□□□ -1.83
GABPB1-209ENST00000559100 TBCELQ5QJ74 424 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 CYP2U1Q7Z449 544 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 TSPAN10Q9H1Z9 355 aaPredicted RBP3.6□□□□□ -1.83
GABPB1-209ENST00000559100 TMPRSS4Q9NRS4 437 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 BRPF3Q9ULD4 1205 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 ATAD2Q6PL18 1390 aa3.6□□□□□ -1.83
GABPB1-209ENST00000559100 TMEM229AB2RXF0 380 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 CD2BP2O95400 341 aaKnown RBP3.59□□□□□ -1.83
GABPB1-209ENST00000559100 INHAP05111 366 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 MPSTP25325 297 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 WNT7BP56706 349 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 ERVK-9P63128 1117 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 XPCQ01831 940 aaPredicted RBP3.59□□□□□ -1.83
GABPB1-209ENST00000559100 TAGLNQ01995 201 aaKnown RBP3.59□□□□□ -1.83
GABPB1-209ENST00000559100 ESCO1Q5FWF5 840 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 C16orf46Q6P387 395 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 RGL4Q8IZJ4 473 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 COL26A1Q96A83 441 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 NGLY1Q96IV0 654 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 MRS2Q9HD23 443 aa3.59□□□□□ -1.83
GABPB1-209ENST00000559100 P4HBP07237 508 aaKnown RBP3.58□□□□□ -1.84
GABPB1-209ENST00000559100 MAPK8P45983 427 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 SCNN1DP51172 638 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 RC3H1Q5TC82 1133 aaKnown RBP3.58□□□□□ -1.84
GABPB1-209ENST00000559100 ALKBH2Q6NS38 261 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 TMC7Q7Z402 723 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 SLC9A9Q8IVB4 645 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 ZNF784Q8NCA9 323 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-209ENST00000559100 SAP130Q9H0E3 1048 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 OSBPL3Q9H4L5 887 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 ETNK1Q9HBU6 452 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 RAB6BQ9NRW1 208 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 PPP1R1BQ9UD71 204 aaPredicted RBP3.58□□□□□ -1.84
GABPB1-209ENST00000559100 ZNF232Q9UNY5 417 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 MAP4K5Q9Y4K4 846 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 TLL2Q9Y6L7 1015 aa3.58□□□□□ -1.84
GABPB1-209ENST00000559100 ARHGEF15O94989 841 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 GNRH1P01148 92 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 LDHBP07195 334 aaKnown RBP3.57□□□□□ -1.84
GABPB1-209ENST00000559100 GTF2E1P29083 439 aaPredicted RBP3.57□□□□□ -1.84
GABPB1-209ENST00000559100 ITGAEP38570 1179 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 SKOR1P84550 965 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 KRT76Q01546 638 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 ATP2B2Q01814 1243 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 PLCB3Q01970 1234 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 TLR1Q15399 786 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 PPP1R26Q5T8A7 1209 aaPredicted RBP3.57□□□□□ -1.84
GABPB1-209ENST00000559100 FBXO33Q7Z6M2 555 aa3.57□□□□□ -1.84
GABPB1-209ENST00000559100 CCDC116Q8IYX3 515 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms