RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
PCAT29-202ENST00000558941 ZNF831Q5JPB2 1677 aa11.15□□□□□ -0.62
PCAT29-202ENST00000558941 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
PCAT29-202ENST00000558941 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
PCAT29-202ENST00000558941 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
PCAT29-202ENST00000558941 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
PCAT29-202ENST00000558941 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
PCAT29-202ENST00000558941 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
PCAT29-202ENST00000558941 ANKRD31Q8N7Z5 1873 aa11.14□□□□□ -0.63
PCAT29-202ENST00000558941 INSRP06213 1382 aa11.14□□□□□ -0.63
PCAT29-202ENST00000558941 POLRMTO00411 1230 aaKnown RBP11.13□□□□□ -0.63
PCAT29-202ENST00000558941 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
PCAT29-202ENST00000558941 PIGBQ92521 554 aa11.13□□□□□ -0.63
PCAT29-202ENST00000558941 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
PCAT29-202ENST00000558941 KDRP35968 1356 aa11.13□□□□□ -0.63
PCAT29-202ENST00000558941 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
PCAT29-202ENST00000558941 TRAF5O00463 557 aa11.12□□□□□ -0.63
PCAT29-202ENST00000558941 EPHX2P34913 555 aa11.12□□□□□ -0.63
PCAT29-202ENST00000558941 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
PCAT29-202ENST00000558941 FKBP8Q14318 412 aa11.12□□□□□ -0.63
PCAT29-202ENST00000558941 CTU1Q7Z7A3 348 aaKnown RBP11.12□□□□□ -0.63
PCAT29-202ENST00000558941 CEP290O15078 2479 aa11.12□□□□□ -0.63
PCAT29-202ENST00000558941 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 SRP68Q9UHB9 627 aaKnown RBP11.11□□□□□ -0.63
PCAT29-202ENST00000558941 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 CARMIL3Q8ND23 1372 aa11.11□□□□□ -0.63
PCAT29-202ENST00000558941 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
PCAT29-202ENST00000558941 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
PCAT29-202ENST00000558941 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
PCAT29-202ENST00000558941 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
PCAT29-202ENST00000558941 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
PCAT29-202ENST00000558941 HACL1Q9UJ83 578 aa11.09□□□□□ -0.63
PCAT29-202ENST00000558941 AKAP11Q9UKA4 1901 aa11.09□□□□□ -0.63
PCAT29-202ENST00000558941 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
PCAT29-202ENST00000558941 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 ARFGEF2Q9Y6D5 1785 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 CD163L1Q9NR16 1453 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 CYP27B1O15528 508 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 TM4SF1P30408 202 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
PCAT29-202ENST00000558941 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
PCAT29-202ENST00000558941 PRUNE2Q8WUY3 3088 aa11.07□□□□□ -0.64
PCAT29-202ENST00000558941 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
PCAT29-202ENST00000558941 ADRA2BP18089 450 aa11.07□□□□□ -0.64
PCAT29-202ENST00000558941 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
PCAT29-202ENST00000558941 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
PCAT29-202ENST00000558941 C21orf2O43822 256 aa11.06□□□□□ -0.64
PCAT29-202ENST00000558941 RFC4P35249 363 aa11.06□□□□□ -0.64
PCAT29-202ENST00000558941 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
PCAT29-202ENST00000558941 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
PCAT29-202ENST00000558941 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
PCAT29-202ENST00000558941 RAPGEFL1Q9UHV5 662 aa11.06□□□□□ -0.64
PCAT29-202ENST00000558941 SMG6Q86US8 1419 aaKnown RBP11.06□□□□□ -0.64
PCAT29-202ENST00000558941 IP6K1Q92551 441 aa11.05□□□□□ -0.64
PCAT29-202ENST00000558941 RPS6KA4O75676 772 aa11.04□□□□□ -0.64
PCAT29-202ENST00000558941 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
PCAT29-202ENST00000558941 TAOK3Q9H2K8 898 aa11.04□□□□□ -0.64
PCAT29-202ENST00000558941 RNF186Q9NXI6 227 aa11.04□□□□□ -0.64
PCAT29-202ENST00000558941 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
PCAT29-202ENST00000558941 LAMA2P24043 3122 aaKnown RBP11.04□□□□□ -0.64
PCAT29-202ENST00000558941 NME9Q86XW9 330 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 C2CD5Q86YS7 1000 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 TJP1Q07157 1748 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
PCAT29-202ENST00000558941 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
PCAT29-202ENST00000558941 TRPA1O75762 1119 aa11.02□□□□□ -0.65
PCAT29-202ENST00000558941 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
PCAT29-202ENST00000558941 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
PCAT29-202ENST00000558941 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
PCAT29-202ENST00000558941 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
PCAT29-202ENST00000558941 MAP3K19Q56UN5 1328 aa11.02□□□□□ -0.65
PCAT29-202ENST00000558941 COL4A5P29400 1685 aa11.01□□□□□ -0.65
PCAT29-202ENST00000558941 COL9A1P20849 921 aa11.01□□□□□ -0.65
PCAT29-202ENST00000558941 NOGQ13253 232 aa11.01□□□□□ -0.65
PCAT29-202ENST00000558941 CENPJQ9HC77 1338 aaPredicted RBP11.01□□□□□ -0.65
PCAT29-202ENST00000558941 H0YGN5 161 aa11□□□□□ -0.65
PCAT29-202ENST00000558941 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
PCAT29-202ENST00000558941 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
PCAT29-202ENST00000558941 CGNL1Q0VF96 1302 aa11□□□□□ -0.65
PCAT29-202ENST00000558941 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
PCAT29-202ENST00000558941 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
PCAT29-202ENST00000558941 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
PCAT29-202ENST00000558941 HOXD11P31277 338 aaPredicted RBP10.99□□□□□ -0.65
PCAT29-202ENST00000558941 SYNE4Q8N205 404 aa10.99□□□□□ -0.65
PCAT29-202ENST00000558941 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
PCAT29-202ENST00000558941 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
PCAT29-202ENST00000558941 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
PCAT29-202ENST00000558941 HOXC9P31274 260 aa10.98□□□□□ -0.65
PCAT29-202ENST00000558941 PLA2G5P39877 138 aa10.98□□□□□ -0.65
PCAT29-202ENST00000558941 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
PCAT29-202ENST00000558941 PKN2Q16513 984 aaKnown RBP10.98□□□□□ -0.65
PCAT29-202ENST00000558941 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
PCAT29-202ENST00000558941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.65
PCAT29-202ENST00000558941 KIAA0100Q14667 2235 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms