RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
LRRC28-210ENST00000558879 ZBTB1Q9Y2K1 713 aa22.73■■□□□ 1.23
LRRC28-210ENST00000558879 GRIN3BO60391 1043 aa22.72■■□□□ 1.23
LRRC28-210ENST00000558879 ANKRD31Q8N7Z5 1873 aa22.71■■□□□ 1.23
LRRC28-210ENST00000558879 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
LRRC28-210ENST00000558879 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
LRRC28-210ENST00000558879 FKBP8Q14318 412 aa22.7■■□□□ 1.22
LRRC28-210ENST00000558879 DDR1Q08345 913 aa22.68■■□□□ 1.22
LRRC28-210ENST00000558879 NARFQ9UHQ1 456 aa22.67■■□□□ 1.22
LRRC28-210ENST00000558879 PARP3Q9Y6F1 533 aa22.67■■□□□ 1.22
LRRC28-210ENST00000558879 HTATSF1O43719 755 aaKnown RBP22.66■■□□□ 1.22
LRRC28-210ENST00000558879 TGFB2P61812 414 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 RALBP1Q15311 655 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 MCM10Q7L590 875 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 FMNL2Q96PY5 1086 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 PLEKHF1Q96S99 279 aa22.66■■□□□ 1.22
LRRC28-210ENST00000558879 ADCY9O60503 1353 aa22.65■■□□□ 1.22
LRRC28-210ENST00000558879 BTBD11A6QL63 1104 aa22.65■■□□□ 1.22
LRRC28-210ENST00000558879 POLRMTO00411 1230 aaKnown RBP22.65■■□□□ 1.22
LRRC28-210ENST00000558879 TM4SF1P30408 202 aa22.65■■□□□ 1.22
LRRC28-210ENST00000558879 TEX13AQ9BXU3 409 aaPredicted RBP22.65■■□□□ 1.22
LRRC28-210ENST00000558879 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
LRRC28-210ENST00000558879 SBF1O95248 1867 aa22.64■■□□□ 1.22
LRRC28-210ENST00000558879 KCNQ3O43525 872 aa22.64■■□□□ 1.21
LRRC28-210ENST00000558879 ZPR1O75312 459 aa22.64■■□□□ 1.21
LRRC28-210ENST00000558879 STARD3NLO95772 234 aa22.64■■□□□ 1.21
LRRC28-210ENST00000558879 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
LRRC28-210ENST00000558879 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
LRRC28-210ENST00000558879 BCL2L12Q9HB09 334 aa22.64■■□□□ 1.21
LRRC28-210ENST00000558879 CACNA1SQ13698 1873 aa22.62■■□□□ 1.21
LRRC28-210ENST00000558879 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
LRRC28-210ENST00000558879 DDX10Q13206 875 aaKnown RBP22.62■■□□□ 1.21
LRRC28-210ENST00000558879 DCTN1Q14203 1278 aa22.62■■□□□ 1.21
LRRC28-210ENST00000558879 ARFGEF2Q9Y6D5 1785 aa22.62■■□□□ 1.21
LRRC28-210ENST00000558879 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
LRRC28-210ENST00000558879 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
LRRC28-210ENST00000558879 NUP98P52948 1817 aa22.6■■□□□ 1.21
LRRC28-210ENST00000558879 IL6STP40189 918 aaPredicted RBP22.6■■□□□ 1.21
LRRC28-210ENST00000558879 DPEP1P16444 411 aa22.59■■□□□ 1.21
LRRC28-210ENST00000558879 NFIXQ14938 502 aa22.59■■□□□ 1.21
LRRC28-210ENST00000558879 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 A0A087WZG4 1122 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 A0A0G2JLW4 131 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 NEFMP07197 916 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 KCNA3P22001 575 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 NFE2L2Q16236 605 aa22.58■■□□□ 1.21
LRRC28-210ENST00000558879 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
LRRC28-210ENST00000558879 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
LRRC28-210ENST00000558879 A1BGP04217 495 aa22.56■■□□□ 1.2
LRRC28-210ENST00000558879 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
LRRC28-210ENST00000558879 CARMIL3Q8ND23 1372 aa22.55■■□□□ 1.2
LRRC28-210ENST00000558879 TAF7Q15545 349 aaPredicted RBP22.55■■□□□ 1.2
LRRC28-210ENST00000558879 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
LRRC28-210ENST00000558879 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
LRRC28-210ENST00000558879 SNRPA1P09661 255 aaKnown RBP22.54■■□□□ 1.2
LRRC28-210ENST00000558879 BCS1LQ9Y276 419 aa22.54■■□□□ 1.2
LRRC28-210ENST00000558879 FER1L6Q2WGJ9 1857 aa22.52■■□□□ 1.2
LRRC28-210ENST00000558879 SERPINB2P05120 415 aa22.52■■□□□ 1.2
LRRC28-210ENST00000558879 TIAM2Q8IVF5 1701 aa22.51■■□□□ 1.19
LRRC28-210ENST00000558879 DICER1Q9UPY3 1922 aaKnown RBP22.51■■□□□ 1.19
LRRC28-210ENST00000558879 CAMTA2O94983 1202 aa22.51■■□□□ 1.19
LRRC28-210ENST00000558879 TBC1D9BQ66K14 1250 aa22.51■■□□□ 1.19
LRRC28-210ENST00000558879 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
LRRC28-210ENST00000558879 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
LRRC28-210ENST00000558879 CHRNA5P30532 468 aa22.5■■□□□ 1.19
LRRC28-210ENST00000558879 THUMPD2Q9BTF0 503 aaKnown RBP22.5■■□□□ 1.19
LRRC28-210ENST00000558879 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
LRRC28-210ENST00000558879 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
LRRC28-210ENST00000558879 ANKRD36CQ5JPF3 1778 aa22.5■■□□□ 1.19
LRRC28-210ENST00000558879 PIP4K2AP48426 406 aaPredicted RBP22.49■■□□□ 1.19
LRRC28-210ENST00000558879 NBPF26B4DH59 902 aa22.48■■□□□ 1.19
LRRC28-210ENST00000558879 NBPF10Q6P3W6 841 aaKnown RBP22.48■■□□□ 1.19
LRRC28-210ENST00000558879 DZIP3Q86Y13 1208 aaKnown RBP22.48■■□□□ 1.19
LRRC28-210ENST00000558879 NBPF15Q8N660 670 aa22.48■■□□□ 1.19
LRRC28-210ENST00000558879 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
LRRC28-210ENST00000558879 MIS18AQ9NYP9 233 aa22.48■■□□□ 1.19
LRRC28-210ENST00000558879 SLX4Q8IY92 1834 aa22.46■■□□□ 1.19
LRRC28-210ENST00000558879 EIF4A1P60842 406 aaKnown RBP22.46■■□□□ 1.19
LRRC28-210ENST00000558879 DALRD3Q5D0E6 543 aaKnown RBP22.46■■□□□ 1.19
LRRC28-210ENST00000558879 BICDL1Q6ZP65 573 aa22.46■■□□□ 1.19
LRRC28-210ENST00000558879 TNRC6CQ9HCJ0 1690 aaKnown RBP22.46■■□□□ 1.19
LRRC28-210ENST00000558879 RGL2O15211 777 aa22.45■■□□□ 1.18
LRRC28-210ENST00000558879 GIGYF1O75420 1035 aaPredicted RBP22.45■■□□□ 1.18
LRRC28-210ENST00000558879 TMPOP42166 694 aaKnown RBP22.45■■□□□ 1.18
LRRC28-210ENST00000558879 PRR5LQ6MZQ0 368 aa22.44■■□□□ 1.18
LRRC28-210ENST00000558879 NPM2Q86SE8 214 aaKnown RBP22.44■■□□□ 1.18
LRRC28-210ENST00000558879 RIPK4P57078 832 aa22.43■■□□□ 1.18
LRRC28-210ENST00000558879 C1QTNF8P60827 252 aa22.43■■□□□ 1.18
LRRC28-210ENST00000558879 CLEC4GQ6UXB4 293 aa22.43■■□□□ 1.18
LRRC28-210ENST00000558879 ARHGAP27Q6ZUM4 889 aa22.42■■□□□ 1.18
LRRC28-210ENST00000558879 LMOD3Q0VAK6 560 aa22.41■■□□□ 1.18
LRRC28-210ENST00000558879 SETDB2Q96T68 719 aa22.4■■□□□ 1.18
LRRC28-210ENST00000558879 GPBP1L1Q9HC44 474 aaPredicted RBP22.4■■□□□ 1.18
LRRC28-210ENST00000558879 BABAM1Q9NWV8 329 aa22.4■■□□□ 1.18
LRRC28-210ENST00000558879 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
LRRC28-210ENST00000558879 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.17
LRRC28-210ENST00000558879 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
LRRC28-210ENST00000558879 C2CD5Q86YS7 1000 aa22.39■■□□□ 1.17
LRRC28-210ENST00000558879 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms