RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 ZPR1O75312 459 aa15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 FCHSD2O94868 740 aa15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 GAS2L2Q8NHY3 880 aa15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 ZNF526Q8TF50 670 aaPredicted RBP15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
SEMA4B-205ENST00000558848 VIRMAQ69YN4 1812 aaKnown RBP15.9■□□□□ 0.14
SEMA4B-205ENST00000558848 NFIXQ14938 502 aa15.9■□□□□ 0.14
SEMA4B-205ENST00000558848 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
SEMA4B-205ENST00000558848 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
SEMA4B-205ENST00000558848 ARFGEF1Q9Y6D6 1849 aa15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 U2SURPO15042 1029 aaKnown RBP15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 ARHGAP27Q6ZUM4 889 aa15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
SEMA4B-205ENST00000558848 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
SEMA4B-205ENST00000558848 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
SEMA4B-205ENST00000558848 STARD3NLO95772 234 aa15.88■□□□□ 0.13
SEMA4B-205ENST00000558848 HSPA6P17066 643 aa15.88■□□□□ 0.13
SEMA4B-205ENST00000558848 CHRNA5P30532 468 aa15.88■□□□□ 0.13
SEMA4B-205ENST00000558848 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
SEMA4B-205ENST00000558848 TEX13AQ9BXU3 409 aaPredicted RBP15.87■□□□□ 0.13
SEMA4B-205ENST00000558848 SERPINB2P05120 415 aa15.86■□□□□ 0.13
SEMA4B-205ENST00000558848 TEFQ10587 303 aa15.86■□□□□ 0.13
SEMA4B-205ENST00000558848 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
SEMA4B-205ENST00000558848 PPP2R1AP30153 589 aa15.85■□□□□ 0.13
SEMA4B-205ENST00000558848 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
SEMA4B-205ENST00000558848 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
SEMA4B-205ENST00000558848 A0A087WZG4 1122 aa15.84■□□□□ 0.13
SEMA4B-205ENST00000558848 IL6STP40189 918 aaPredicted RBP15.84■□□□□ 0.13
SEMA4B-205ENST00000558848 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
SEMA4B-205ENST00000558848 AFDNP55196 1824 aaKnown RBP15.84■□□□□ 0.13
SEMA4B-205ENST00000558848 TOMM70O94826 608 aa15.83■□□□□ 0.12
SEMA4B-205ENST00000558848 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
SEMA4B-205ENST00000558848 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
SEMA4B-205ENST00000558848 CARMIL3Q8ND23 1372 aa15.83■□□□□ 0.12
SEMA4B-205ENST00000558848 KCNQ3O43525 872 aa15.82■□□□□ 0.12
SEMA4B-205ENST00000558848 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
SEMA4B-205ENST00000558848 NUDCQ9Y266 331 aa15.82■□□□□ 0.12
SEMA4B-205ENST00000558848 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
SEMA4B-205ENST00000558848 TBC1D9BQ66K14 1250 aa15.81■□□□□ 0.12
SEMA4B-205ENST00000558848 DLEC1Q9Y238 1755 aa15.81■□□□□ 0.12
SEMA4B-205ENST00000558848 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 ZC3H4Q9UPT8 1303 aaKnown RBP15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 A1BGP04217 495 aa15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 PRELPP51888 382 aa15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 USP16Q9Y5T5 823 aa15.8■□□□□ 0.12
SEMA4B-205ENST00000558848 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 TTLL6Q8N841 843 aa15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 BRIP1Q9BX63 1249 aa15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 RNF181Q9P0P0 153 aa15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 TBC1D2BQ9UPU7 963 aa15.79■□□□□ 0.12
SEMA4B-205ENST00000558848 SBF1O95248 1867 aa15.78■□□□□ 0.12
SEMA4B-205ENST00000558848 PRR5LQ6MZQ0 368 aa15.78■□□□□ 0.12
SEMA4B-205ENST00000558848 C2CD5Q86YS7 1000 aa15.78■□□□□ 0.12
SEMA4B-205ENST00000558848 RBM46Q8TBY0 533 aaKnown RBP15.78■□□□□ 0.12
SEMA4B-205ENST00000558848 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
SEMA4B-205ENST00000558848 H0YIN7 160 aa15.77■□□□□ 0.12
SEMA4B-205ENST00000558848 NFKBIEO00221 500 aa15.77■□□□□ 0.12
SEMA4B-205ENST00000558848 BICDL1Q6ZP65 573 aa15.77■□□□□ 0.12
SEMA4B-205ENST00000558848 MCM10Q7L590 875 aa15.77■□□□□ 0.12
SEMA4B-205ENST00000558848 DNAJC5GQ8N7S2 189 aa15.77■□□□□ 0.12
SEMA4B-205ENST00000558848 KDM2BQ8NHM5 1336 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 RGL2O15211 777 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 SNRPA1P09661 255 aaKnown RBP15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 LMNB1P20700 586 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 APLP1P51693 650 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 RASSF7Q02833 373 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
SEMA4B-205ENST00000558848 PDE6BP35913 854 aa15.75■□□□□ 0.11
SEMA4B-205ENST00000558848 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
SEMA4B-205ENST00000558848 NBPF26B4DH59 902 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 FSTL1Q12841 308 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 NBPF10Q6P3W6 841 aaKnown RBP15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 NBPF15Q8N660 670 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 SETDB2Q96T68 719 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 BCORQ6W2J9 1755 aa15.74■□□□□ 0.11
SEMA4B-205ENST00000558848 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
SEMA4B-205ENST00000558848 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
SEMA4B-205ENST00000558848 COL11A2P13942 1736 aaPredicted RBP15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 KLRG2A4D1S0 409 aaPredicted RBP15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 SRGNP10124 158 aa15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 PIP4K2AP48426 406 aaPredicted RBP15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 CNBD1Q8NA66 436 aa15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 ZNF330Q9Y3S2 320 aaPredicted RBP15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
SEMA4B-205ENST00000558848 LTBP3Q9NS15 1303 aa15.71■□□□□ 0.11
SEMA4B-205ENST00000558848 STYK1Q6J9G0 422 aa15.71■□□□□ 0.11
SEMA4B-205ENST00000558848 CCDC24Q8N4L8 307 aa15.71■□□□□ 0.11
SEMA4B-205ENST00000558848 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms