RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
SPG11-212ENST00000558790 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
SPG11-212ENST00000558790 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
SPG11-212ENST00000558790 CCDC7Q96M83 1385 aa13.83□□□□□ -0.19
SPG11-212ENST00000558790 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.19
SPG11-212ENST00000558790 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
SPG11-212ENST00000558790 SLC24A3Q9HC58 644 aa13.83□□□□□ -0.2
SPG11-212ENST00000558790 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
SPG11-212ENST00000558790 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
SPG11-212ENST00000558790 EMP3P54852 163 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 PTGDRQ13258 359 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 C6orf132Q5T0Z8 1188 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 ERBB3P21860 1342 aa13.82□□□□□ -0.2
SPG11-212ENST00000558790 FCHSD2O94868 740 aa13.81□□□□□ -0.2
SPG11-212ENST00000558790 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■□□□□ 10.7
SPG11-212ENST00000558790 FECHP22830 423 aa13.81□□□□□ -0.2
SPG11-212ENST00000558790 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
SPG11-212ENST00000558790 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
SPG11-212ENST00000558790 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
SPG11-212ENST00000558790 TXNRD1Q16881 649 aa13.8□□□□□ -0.2
SPG11-212ENST00000558790 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
SPG11-212ENST00000558790 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
SPG11-212ENST00000558790 LY75O60449 1722 aa13.79□□□□□ -0.2
SPG11-212ENST00000558790 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
SPG11-212ENST00000558790 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
SPG11-212ENST00000558790 EXOC5O00471 708 aa13.78□□□□□ -0.2
SPG11-212ENST00000558790 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
SPG11-212ENST00000558790 GNPATO15228 680 aa13.77□□□□□ -0.21
SPG11-212ENST00000558790 HIC1Q14526 733 aa13.77□□□□□ -0.21
SPG11-212ENST00000558790 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPG11-212ENST00000558790 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
SPG11-212ENST00000558790 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
SPG11-212ENST00000558790 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
SPG11-212ENST00000558790 NME9Q86XW9 330 aa13.76□□□□□ -0.21
SPG11-212ENST00000558790 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
SPG11-212ENST00000558790 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
SPG11-212ENST00000558790 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
SPG11-212ENST00000558790 ZNF827Q17R98 1081 aa13.75□□□□□ -0.21
SPG11-212ENST00000558790 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
SPG11-212ENST00000558790 A0A1W2PP64 1363 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 ADCY9O60503 1353 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 WDR90Q96KV7 1748 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 COL9A1P20849 921 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 PRELPP51888 382 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
SPG11-212ENST00000558790 IL2RBP14784 551 aa13.73□□□□□ -0.21
SPG11-212ENST00000558790 ANKRD24Q8TF21 1146 aa13.73□□□□□ -0.21
SPG11-212ENST00000558790 KIF20BQ96Q89 1820 aa13.73□□□□□ -0.21
SPG11-212ENST00000558790 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
SPG11-212ENST00000558790 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.21
SPG11-212ENST00000558790 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
SPG11-212ENST00000558790 PTPREP23469 700 aa13.71□□□□□ -0.21
SPG11-212ENST00000558790 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
SPG11-212ENST00000558790 C5P01031 1676 aa13.71□□□□□ -0.21
SPG11-212ENST00000558790 TNS4Q8IZW8 715 aa13.7□□□□□ -0.22
SPG11-212ENST00000558790 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
SPG11-212ENST00000558790 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
SPG11-212ENST00000558790 HTRA3P83110 453 aa13.69□□□□□ -0.22
SPG11-212ENST00000558790 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
SPG11-212ENST00000558790 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
SPG11-212ENST00000558790 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
SPG11-212ENST00000558790 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
SPG11-212ENST00000558790 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
SPG11-212ENST00000558790 PSEN2P49810 448 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 CCDC102AQ96A19 550 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 HS3ST6Q96QI5 342 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 ITGB4P16144 1822 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 MEGF6O75095 1541 aa13.68□□□□□ -0.22
SPG11-212ENST00000558790 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
SPG11-212ENST00000558790 APLP1P51693 650 aa13.67□□□□□ -0.22
SPG11-212ENST00000558790 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
SPG11-212ENST00000558790 NSD2O96028 1365 aa13.67□□□□□ -0.22
SPG11-212ENST00000558790 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
SPG11-212ENST00000558790 AK7Q96M32 723 aa13.66□□□□□ -0.22
SPG11-212ENST00000558790 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
SPG11-212ENST00000558790 IRF6O14896 467 aa13.65□□□□□ -0.22
SPG11-212ENST00000558790 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
SPG11-212ENST00000558790 IP6K1Q92551 441 aa13.65□□□□□ -0.22
SPG11-212ENST00000558790 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
SPG11-212ENST00000558790 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
SPG11-212ENST00000558790 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
SPG11-212ENST00000558790 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
SPG11-212ENST00000558790 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
SPG11-212ENST00000558790 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
SPG11-212ENST00000558790 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
SPG11-212ENST00000558790 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 KCNQ4P56696 695 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 PRSS12P56730 875 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 ANKRD26Q9UPS8 1709 aa13.63□□□□□ -0.23
SPG11-212ENST00000558790 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
SPG11-212ENST00000558790 UBR3Q6ZT12 1888 aa13.62□□□□□ -0.23
SPG11-212ENST00000558790 POLD1P28340 1107 aa13.62□□□□□ -0.23
SPG11-212ENST00000558790 HOXC9P31274 260 aa13.62□□□□□ -0.23
SPG11-212ENST00000558790 PROX2Q3B8N5 592 aa13.62□□□□□ -0.23
SPG11-212ENST00000558790 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms