RNA–Protein interactions for RNA: ENST00000558677.5

TM2D3-205, Transcript of TM2 domain containing 3, humanhuman

TSL 5

Gene TM2D3, Length 878 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-205ENST00000558677 COL15A1P39059 1388 aa31.15■■■□□ 2.58
TM2D3-205ENST00000558677 CANXP27824 592 aaKnown RBP31.13■■■□□ 2.57
TM2D3-205ENST00000558677 ZEB1P37275 1124 aaPredicted RBP31.13■■■□□ 2.57
TM2D3-205ENST00000558677 DCTN1Q14203 1278 aa31.13■■■□□ 2.57
TM2D3-205ENST00000558677 FKBP8Q14318 412 aa31.13■■■□□ 2.57
TM2D3-205ENST00000558677 USPL1Q5W0Q7 1092 aa31.12■■■□□ 2.57
TM2D3-205ENST00000558677 MYBBP1AQ9BQG0 1328 aaKnown RBP31.12■■■□□ 2.57
TM2D3-205ENST00000558677 MAPK8IP3Q9UPT6 1336 aa31.12■■■□□ 2.57
TM2D3-205ENST00000558677 GOLGB1Q14789 3259 aaKnown RBP31.11■■■□□ 2.57
TM2D3-205ENST00000558677 PLEKHF1Q96S99 279 aa31.11■■■□□ 2.57
TM2D3-205ENST00000558677 NARFQ9UHQ1 456 aa31.1■■■□□ 2.57
TM2D3-205ENST00000558677 C10orf71Q711Q0 1435 aa31.09■■■□□ 2.57
TM2D3-205ENST00000558677 KCNQ3O43525 872 aa31.09■■■□□ 2.57
TM2D3-205ENST00000558677 TGFB2P61812 414 aa31.09■■■□□ 2.57
TM2D3-205ENST00000558677 WWC3Q9ULE0 1092 aa31.08■■■□□ 2.57
TM2D3-205ENST00000558677 A0A087WZG4 1122 aa31.07■■■□□ 2.56
TM2D3-205ENST00000558677 NFE2L2Q16236 605 aa31.07■■■□□ 2.56
TM2D3-205ENST00000558677 NPM2Q86SE8 214 aaKnown RBP31.07■■■□□ 2.56
TM2D3-205ENST00000558677 KIF13BQ9NQT8 1826 aa31.07■■■□□ 2.56
TM2D3-205ENST00000558677 TAF7Q15545 349 aaPredicted RBP31.06■■■□□ 2.56
TM2D3-205ENST00000558677 EIF5P55010 431 aaKnown RBP31.05■■■□□ 2.56
TM2D3-205ENST00000558677 DDR1Q08345 913 aa31.05■■■□□ 2.56
TM2D3-205ENST00000558677 ZNF330Q9Y3S2 320 aaPredicted RBP31.05■■■□□ 2.56
TM2D3-205ENST00000558677 PXDNLA1KZ92 1463 aa31.05■■■□□ 2.56
TM2D3-205ENST00000558677 TM4SF1P30408 202 aa31.04■■■□□ 2.56
TM2D3-205ENST00000558677 ZNF784Q8NCA9 323 aaPredicted RBP31.04■■■□□ 2.56
TM2D3-205ENST00000558677 A0A0G2JLW4 131 aa31.02■■■□□ 2.56
TM2D3-205ENST00000558677 POLRMTO00411 1230 aaKnown RBP31.02■■■□□ 2.56
TM2D3-205ENST00000558677 SNRPA1P09661 255 aaKnown RBP31.02■■■□□ 2.56
TM2D3-205ENST00000558677 IL6STP40189 918 aaPredicted RBP31.02■■■□□ 2.56
TM2D3-205ENST00000558677 PNISRQ8TF01 805 aaKnown RBP31.02■■■□□ 2.56
TM2D3-205ENST00000558677 DLG5Q8TDM6 1919 aa31.02■■■□□ 2.56
TM2D3-205ENST00000558677 A1BGP04217 495 aa31■■■□□ 2.55
TM2D3-205ENST00000558677 USP16Q9Y5T5 823 aa31■■■□□ 2.55
TM2D3-205ENST00000558677 NFIXQ14938 502 aa30.99■■■□□ 2.55
TM2D3-205ENST00000558677 N4BP2Q86UW6 1770 aaPredicted RBP30.99■■■□□ 2.55
TM2D3-205ENST00000558677 DPEP1P16444 411 aa30.98■■■□□ 2.55
TM2D3-205ENST00000558677 WDR43Q15061 677 aaKnown RBP eCLIP30.98■■■□□ 2.55
TM2D3-205ENST00000558677 BCL2L12Q9HB09 334 aa30.98■■■□□ 2.55
TM2D3-205ENST00000558677 MIS18AQ9NYP9 233 aa30.98■■■□□ 2.55
TM2D3-205ENST00000558677 KIAA1551Q9HCM1 1747 aa30.98■■■□□ 2.55
TM2D3-205ENST00000558677 PRAMEF22A3QJZ6 481 aa30.96■■■□□ 2.55
TM2D3-205ENST00000558677 PRKRIP1Q9H875 184 aaPredicted RBP30.96■■■□□ 2.55
TM2D3-205ENST00000558677 TBC1D2BQ9UPU7 963 aa30.96■■■□□ 2.55
TM2D3-205ENST00000558677 BCS1LQ9Y276 419 aa30.96■■■□□ 2.55
TM2D3-205ENST00000558677 THUMPD2Q9BTF0 503 aaKnown RBP30.95■■■□□ 2.55
TM2D3-205ENST00000558677 RIPK4P57078 832 aa30.94■■■□□ 2.54
TM2D3-205ENST00000558677 SERPINB2P05120 415 aa30.93■■■□□ 2.54
TM2D3-205ENST00000558677 BICDL1Q6ZP65 573 aa30.93■■■□□ 2.54
TM2D3-205ENST00000558677 LMOD3Q0VAK6 560 aa30.92■■■□□ 2.54
TM2D3-205ENST00000558677 SCN7AQ01118 1682 aa30.91■■■□□ 2.54
TM2D3-205ENST00000558677 PIP4K2AP48426 406 aaPredicted RBP30.91■■■□□ 2.54
TM2D3-205ENST00000558677 DZIP3Q86Y13 1208 aaKnown RBP30.91■■■□□ 2.54
TM2D3-205ENST00000558677 PIM2Q9P1W9 311 aa30.91■■■□□ 2.54
TM2D3-205ENST00000558677 TMPOP42166 694 aaKnown RBP30.9■■■□□ 2.54
TM2D3-205ENST00000558677 KCNA3P22001 575 aa30.89■■■□□ 2.54
TM2D3-205ENST00000558677 TBC1D9BQ66K14 1250 aa30.89■■■□□ 2.54
TM2D3-205ENST00000558677 CCDC146Q8IYE0 955 aa30.89■■■□□ 2.54
TM2D3-205ENST00000558677 KDM3BQ7LBC6 1761 aa30.89■■■□□ 2.54
TM2D3-205ENST00000558677 AFDNP55196 1824 aaKnown RBP30.88■■■□□ 2.53
TM2D3-205ENST00000558677 NRXN2Q9P2S2 1712 aa30.87■■■□□ 2.53
TM2D3-205ENST00000558677 CAMTA2O94983 1202 aa30.87■■■□□ 2.53
TM2D3-205ENST00000558677 RUNDC1Q96C34 613 aa30.87■■■□□ 2.53
TM2D3-205ENST00000558677 CHRNA5P30532 468 aa30.86■■■□□ 2.53
TM2D3-205ENST00000558677 EIF4A1P60842 406 aaKnown RBP30.86■■■□□ 2.53
TM2D3-205ENST00000558677 CARMIL3Q8ND23 1372 aa30.85■■■□□ 2.53
TM2D3-205ENST00000558677 GIGYF1O75420 1035 aaPredicted RBP30.85■■■□□ 2.53
TM2D3-205ENST00000558677 DALRD3Q5D0E6 543 aaKnown RBP30.85■■■□□ 2.53
TM2D3-205ENST00000558677 TSPYL4Q9UJ04 414 aa30.85■■■□□ 2.53
TM2D3-205ENST00000558677 BRCA1P38398 1863 aaKnown RBP30.84■■■□□ 2.53
TM2D3-205ENST00000558677 LAMB4A4D0S4 1761 aa30.84■■■□□ 2.53
TM2D3-205ENST00000558677 NEUROD2Q15784 382 aa30.84■■■□□ 2.53
TM2D3-205ENST00000558677 SETDB2Q96T68 719 aa30.84■■■□□ 2.53
TM2D3-205ENST00000558677 ADAMTS8Q9UP79 889 aa30.84■■■□□ 2.53
TM2D3-205ENST00000558677 RRP7AQ9Y3A4 280 aaKnown RBP30.84■■■□□ 2.53
TM2D3-205ENST00000558677 NBPF26B4DH59 902 aa30.83■■■□□ 2.53
TM2D3-205ENST00000558677 NBPF10Q6P3W6 841 aaKnown RBP30.83■■■□□ 2.53
TM2D3-205ENST00000558677 ARHGAP27Q6ZUM4 889 aa30.83■■■□□ 2.53
TM2D3-205ENST00000558677 NBPF15Q8N660 670 aa30.83■■■□□ 2.53
TM2D3-205ENST00000558677 ZNF652Q9Y2D9 606 aa30.83■■■□□ 2.53
TM2D3-205ENST00000558677 NPHP1O15259 732 aa30.82■■■□□ 2.52
TM2D3-205ENST00000558677 BCORQ6W2J9 1755 aa30.82■■■□□ 2.52
TM2D3-205ENST00000558677 CLEC4GQ6UXB4 293 aa30.81■■■□□ 2.52
TM2D3-205ENST00000558677 BABAM1Q9NWV8 329 aa30.81■■■□□ 2.52
TM2D3-205ENST00000558677 ATP10DQ9P241 1426 aa30.8■■■□□ 2.52
TM2D3-205ENST00000558677 H0YIN7 160 aa30.78■■■□□ 2.52
TM2D3-205ENST00000558677 C2CD5Q86YS7 1000 aa30.78■■■□□ 2.52
TM2D3-205ENST00000558677 ADCY9O60503 1353 aa30.78■■■□□ 2.52
TM2D3-205ENST00000558677 ARFGEF1Q9Y6D6 1849 aa30.77■■■□□ 2.52
TM2D3-205ENST00000558677 PRR5LQ6MZQ0 368 aa30.77■■■□□ 2.52
TM2D3-205ENST00000558677 CNBD1Q8NA66 436 aa30.77■■■□□ 2.52
TM2D3-205ENST00000558677 ZNF316A6NFI3 1004 aaPredicted RBP30.76■■■□□ 2.51
TM2D3-205ENST00000558677 RGL2O15211 777 aa30.76■■■□□ 2.51
TM2D3-205ENST00000558677 PDE6BP35913 854 aa30.76■■■□□ 2.51
TM2D3-205ENST00000558677 BRIP1Q9BX63 1249 aa30.76■■■□□ 2.51
TM2D3-205ENST00000558677 ST5P78524 1137 aa30.75■■■□□ 2.51
TM2D3-205ENST00000558677 NGEFQ8N5V2 710 aa30.75■■■□□ 2.51
TM2D3-205ENST00000558677 PDZRN3Q9UPQ7 1066 aa30.75■■■□□ 2.51
TM2D3-205ENST00000558677 MYL6BP14649 208 aa30.73■■■□□ 2.51
TM2D3-205ENST00000558677 GPBP1L1Q9HC44 474 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms