RNA–Protein interactions for RNA: ENST00000558619.5

CRTC3-206, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-206ENST00000558619 ARHGAP27Q6ZUM4 889 aa23.13■■□□□ 1.29
CRTC3-206ENST00000558619 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
CRTC3-206ENST00000558619 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
CRTC3-206ENST00000558619 POLRMTO00411 1230 aaKnown RBP23.12■■□□□ 1.29
CRTC3-206ENST00000558619 GNAT3A8MTJ3 354 aa23.11■■□□□ 1.29
CRTC3-206ENST00000558619 TEFQ10587 303 aa23.11■■□□□ 1.29
CRTC3-206ENST00000558619 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
CRTC3-206ENST00000558619 PIM2Q9P1W9 311 aa23.11■■□□□ 1.29
CRTC3-206ENST00000558619 NRXN2Q9P2S2 1712 aa23.11■■□□□ 1.29
CRTC3-206ENST00000558619 KCNA3P22001 575 aa23.1■■□□□ 1.29
CRTC3-206ENST00000558619 TM4SF1P30408 202 aa23.1■■□□□ 1.29
CRTC3-206ENST00000558619 NARFQ9UHQ1 456 aa23.1■■□□□ 1.29
CRTC3-206ENST00000558619 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
CRTC3-206ENST00000558619 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
CRTC3-206ENST00000558619 SCN7AQ01118 1682 aa23.08■■□□□ 1.29
CRTC3-206ENST00000558619 DLEC1Q9Y238 1755 aa23.08■■□□□ 1.29
CRTC3-206ENST00000558619 STARD3NLO95772 234 aa23.06■■□□□ 1.28
CRTC3-206ENST00000558619 CHRNA5P30532 468 aa23.06■■□□□ 1.28
CRTC3-206ENST00000558619 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
CRTC3-206ENST00000558619 HEG1Q9ULI3 1381 aa23.05■■□□□ 1.28
CRTC3-206ENST00000558619 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
CRTC3-206ENST00000558619 NFIXQ14938 502 aa23.05■■□□□ 1.28
CRTC3-206ENST00000558619 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
CRTC3-206ENST00000558619 KIF3CO14782 793 aa23.04■■□□□ 1.28
CRTC3-206ENST00000558619 ZNF496Q96IT1 587 aaPredicted RBP23.04■■□□□ 1.28
CRTC3-206ENST00000558619 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
CRTC3-206ENST00000558619 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
CRTC3-206ENST00000558619 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
CRTC3-206ENST00000558619 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 A0A087WZG4 1122 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 HSPA6P17066 643 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
CRTC3-206ENST00000558619 SBF1O95248 1867 aa23.02■■□□□ 1.28
CRTC3-206ENST00000558619 SERPINB2P05120 415 aa23.01■■□□□ 1.27
CRTC3-206ENST00000558619 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
CRTC3-206ENST00000558619 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
CRTC3-206ENST00000558619 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
CRTC3-206ENST00000558619 PPP2R1AP30153 589 aa23■■□□□ 1.27
CRTC3-206ENST00000558619 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
CRTC3-206ENST00000558619 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
CRTC3-206ENST00000558619 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
CRTC3-206ENST00000558619 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
CRTC3-206ENST00000558619 BICDL1Q6ZP65 573 aa22.99■■□□□ 1.27
CRTC3-206ENST00000558619 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
CRTC3-206ENST00000558619 RNF181Q9P0P0 153 aa22.98■■□□□ 1.27
CRTC3-206ENST00000558619 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
CRTC3-206ENST00000558619 ANKRD31Q8N7Z5 1873 aa22.97■■□□□ 1.27
CRTC3-206ENST00000558619 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
CRTC3-206ENST00000558619 CARMIL3Q8ND23 1372 aa22.97■■□□□ 1.27
CRTC3-206ENST00000558619 IL6STP40189 918 aaPredicted RBP22.96■■□□□ 1.27
CRTC3-206ENST00000558619 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
CRTC3-206ENST00000558619 TBC1D9BQ66K14 1250 aa22.95■■□□□ 1.26
CRTC3-206ENST00000558619 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
CRTC3-206ENST00000558619 COL11A2P13942 1736 aaPredicted RBP22.94■■□□□ 1.26
CRTC3-206ENST00000558619 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
CRTC3-206ENST00000558619 KCNQ3O43525 872 aa22.94■■□□□ 1.26
CRTC3-206ENST00000558619 TOMM70O94826 608 aa22.94■■□□□ 1.26
CRTC3-206ENST00000558619 A1BGP04217 495 aa22.94■■□□□ 1.26
CRTC3-206ENST00000558619 C2CD5Q86YS7 1000 aa22.94■■□□□ 1.26
CRTC3-206ENST00000558619 KDM2BQ8NHM5 1336 aa22.93■■□□□ 1.26
CRTC3-206ENST00000558619 MCM10Q7L590 875 aa22.93■■□□□ 1.26
CRTC3-206ENST00000558619 TTLL6Q8N841 843 aa22.93■■□□□ 1.26
CRTC3-206ENST00000558619 CCDC88AQ3V6T2 1871 aa22.93■■□□□ 1.26
CRTC3-206ENST00000558619 H0YIN7 160 aa22.92■■□□□ 1.26
CRTC3-206ENST00000558619 RASSF7Q02833 373 aa22.92■■□□□ 1.26
CRTC3-206ENST00000558619 C16orf71Q8IYS4 520 aaPredicted RBP22.92■■□□□ 1.26
CRTC3-206ENST00000558619 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
CRTC3-206ENST00000558619 CACNA1SQ13698 1873 aa22.92■■□□□ 1.26
CRTC3-206ENST00000558619 LAMB4A4D0S4 1761 aa22.9■■□□□ 1.26
CRTC3-206ENST00000558619 NPHP1O15259 732 aa22.89■■□□□ 1.25
CRTC3-206ENST00000558619 DZIP3Q86Y13 1208 aaKnown RBP22.89■■□□□ 1.25
CRTC3-206ENST00000558619 USP16Q9Y5T5 823 aa22.89■■□□□ 1.25
CRTC3-206ENST00000558619 CAMTA2O94983 1202 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 PDE6BP35913 854 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 DCTN1Q14203 1278 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 SETDB2Q96T68 719 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 PDZRN3Q9UPQ7 1066 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 WDR90Q96KV7 1748 aa22.88■■□□□ 1.25
CRTC3-206ENST00000558619 ZC3H4Q9UPT8 1303 aaKnown RBP22.87■■□□□ 1.25
CRTC3-206ENST00000558619 ARFGEF2Q9Y6D5 1785 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 PRAMEF22A3QJZ6 481 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 HTATSF1O43719 755 aaKnown RBP22.87■■□□□ 1.25
CRTC3-206ENST00000558619 NEFMP07197 916 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 SNRPA1P09661 255 aaKnown RBP22.87■■□□□ 1.25
CRTC3-206ENST00000558619 LMNB1P20700 586 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
CRTC3-206ENST00000558619 APLP1P51693 650 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 CCDC24Q8N4L8 307 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 RBM46Q8TBY0 533 aaKnown RBP22.87■■□□□ 1.25
CRTC3-206ENST00000558619 ZNF622Q969S3 477 aaKnown RBP eCLIP22.87■■□□□ 1.257e-6■□□□□ 9.9
CRTC3-206ENST00000558619 BRIP1Q9BX63 1249 aa22.87■■□□□ 1.25
CRTC3-206ENST00000558619 CNBD1Q8NA66 436 aa22.86■■□□□ 1.25
CRTC3-206ENST00000558619 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
CRTC3-206ENST00000558619 ST5P78524 1137 aa22.85■■□□□ 1.25
CRTC3-206ENST00000558619 RRAGCQ9HB90 399 aa22.85■■□□□ 1.25
CRTC3-206ENST00000558619 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
CRTC3-206ENST00000558619 DICER1Q9UPY3 1922 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms